Aryl Hydrocarbon Receptor Nuclear Translocator 2

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Aryl Hydrocarbon Receptor Nuclear Translocator 2
  Conformer 1
(PDB) 		7xi3 (A)
  Conformer 2
(PDB) 		7xi4 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 96 2.64   144 - 317
2 56 1.57   65 - 130
3 104 1.34   318 - 436

Sequence


           __________________________________________________________116___________________________________________________________ 
 7xi3(A) : *****SKFSRENHSEIERRRRNKMTQYITELSDMVPTCSALARKPDKLTILRMAVSHMKSMRG---kPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWFGST 
         :                                                                                                                          
 7xi4(A) : SSADKERLARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLRGTGNkPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEWFGST 
           __________________________________________________________142___________________________________________________________ 

           ______________________________________________________________317_______________________________________________________ 
 7xi3(A) : LYEQVHPDDVEKLREQLCTSENmGSRRSFICRMRCGNaQYAVVHCTGYIKAWPgSKYCLVAIGRLQVTSpTEFLSRHNSDGIITFVDPRCISVIGYQPQDLLGKDILEFCHPEDQSHLRE 
         :                                                                                                                          
 7xi4(A) : LYDQVHPDDVDKLREQLSTS---gSRRSFICRMRCGTSSfVVVHCTGYIKA-----fCLVAIGRLQV---tEFISRHNIEGIFTFVDHRCVATVGYQPQELLGKNIVEFCHPEDQQLLRD 
           ______________________________________________________________343_______________________________________________________ 

           _______________________________________________________                                                                  
 7xi3(A) : SFQQVVKLKGQVLSVMYRFRTKNREWLLIRTSSFTFQNPYSDEIEYVTCTNTNVK                                                                  
         :                                                                                                                          
 7xi4(A) : SFQQVVKLKGQVLSVMFRFRSKTREWLWMRTSSFTFQNPYSDEIEYIICTNTNV*                                                                  
           _______________________________________________________                                                                  

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		27.3
Translation
(A) 		0.2
Closure
(%) 		67.7
Bending Residues
( green ) 		  116 - 144
Bending Region Analysis
Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( yellow ) 		3
Rotation Angle
(deg) 		30.8
Translation
(A) 		1.1
Closure
(%) 		51.1
Bending Residues
( green ) 		  317 - 336
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

Conformer 1 Contact:
Residue 1 ———› Residue 3

Conformer 2 Contact:
Residue 3 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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