Lysozyme (E.C.3.2.1.17)

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Lysozyme (E.C.3.2.1.17)
  Conformer 1
(PDB) 		114l  
  Conformer 2
(PDB) 		151l  
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 99 0.74   3 - 13   73 - 160
2 59 1.3   14 - 72

Sequence


           ______7_______________________________________________________________72________________________________________________ 
 114l    : MNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKTELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRM 
         :                                                                                                                          
 151l    : MNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLAAAASLNAAKSELDKAIGRNCNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRCALINMVFQMGETGVAGFTNSLRM 
           ______7_______________________________________________________________72________________________________________________ 

           __________________________________________                                                                               
 114l    : LQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYK                                                                               
         :                                                                                                                          
 151l    : LQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYK                                                                               
           __________________________________________                                                                               

Morph
Morph animation in progress.
Status: Initialising

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		33.3
Translation
(A) 		-2.0
Closure
(%) 		63.2
Bending Residues
( green ) 		  7 - 14
  72 - 75
Bending Region Analysis

Dynamic Contact Graph

The dynamic contact graph is still being generated. Progress: Initialising

PyMOL Script

Download and extract PyMOL PML script file Download