Protein (Heat Shock Locus U)

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Protein (Heat Shock Locus U)
  Conformer 1
(PDB) 		1do2 (A)
  Conformer 2
(PDB) 		1do2 (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 295 3.0   4 - 333
2 108 0.77   334 - 441

Sequence


           ________________________________________________________________________________________________________________________ 
 1do2(A) : SEMTPREIVSELDKHIIGQDNAKRSVAIALRNRWRRMQLNEELRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRDLTDAAVKMVRVQAIEKNRY 
         :                                                                                                                          
 1do2(B) : SEMTPREIVSELDKHIIGQDNAKRSVAIALRNRWRRMQLNEELRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRDLTDAAVKMVRVQAIEKNRY 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 1do2(A) : RAEELAEERILDVLIPPAKNNWGQTEQQQEPSAARQAFRKKLREGQLDDKEIEkQKARKLKIKDAMKLLIEEEAAKLVNPEELKQDAIDAVEQHGIVFIDEIDKICKRGESSGPDVSREG 
         :                                                                                                                          
 1do2(B) : RAEELAEERILDVLIPPAKNNWGQTEQQQEPSAARQAFRKKLREGQLDDKEIEkQKARKLKIKDAMKLLIEEEAAKLVNPEELKQDAIDAVEQHGIVFIDEIDKICKRGESSGPDVSREG 
           ________________________________________________________________________________________________________________________ 

           ______________________________________________________333_______________________________________________________________ 
 1do2(A) : VQRDLLPLVEGCTVSTKHGMVKTDHILFIASGAFQIAKPSDLIPELQGRLPIRVELQALTTSDFERILTEPNASITVQYKALMATEGVNIEFTDSGIKRIAEAAWQVNESTENIGARRLH 
         :                                                                                                                          
 1do2(B) : VQRDLLPLVEGCTVSTKHGMVKTDHILFIASGAFQIAKPSDLIPELQGRLPIRVELQALTTSDFERILTEPNASITVQYKALMATEGVNIEFTDSGIKRIAEAAWQVNESTENIGARRLH 
           ______________________________________________________333_______________________________________________________________ 

           _______________________________________________                                                                          
 1do2(A) : TVLERLMEEISYDASDLSGQNITIDADYVSKHLDALVADEDLSRFIL                                                                          
         :                                                                                                                          
 1do2(B) : TVLERLMEEISYDASDLSGQNITIDADYVSKHLDALVADEDLSRFIL                                                                          
           _______________________________________________                                                                          

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		23.9
Translation
(A) 		-1.1
Closure
(%) 		56.5
Bending Residues
( green ) 		  333 - 334
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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