S-Arrestin

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name S-Arrestin
  Conformer 1
(PDB) 		4zrg (A)
  Conformer 2
(PDB) 		4j2q (A)
  Window Length 7
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 175 2.03   176 - 295   298 - 322   325 - 357
2 152 2.12   14 - 175   296 - 297   323 - 324

Sequence


           ________________________________________________________________________________________________________________________ 
 4zrg(A) : *VIFKKISRDKSVTIYLGKRDYIDHVERVEPVDGVVLVDPELVKGKRVYVSLTCAFRYG------gLSFRRDLYFSQVQVFPPVGASGATTRLQESLIKKLGANTYPFLLTFPDYLPCSV 
         :                                                                                                                          
 4j2q(A) : HVIFKKISRDKSVTIYLGKRDYIDHVERVEPVDGVVLVDPELVKGKRVYVSLTCAFRYGQEDIDmGLSFRRDLYFSQVQVFPPVGASGATTRLQESLIKKLGANTYPFLLTFPDYLPCSV 
           ________________________________________________________________________________________________________________________ 

           __________________________________________175___________________________________________________________________________ 
 4zrg(A) : MLQPAPQDVGKSCGVDFEIKAFATHSTDVEEDKIPKKSSVRLLIEKVQHAPRDMGPQPRAEASWQFFMSDKPLRLAVSLSKEIYYHGEPIPVTVAVTNSTEKTVKKIKVLVEQVTNVVLY 
         :                                                                                                                          
 4j2q(A) : MLQPAPQDVGKSCGVDFEIKAFATH-------kIPKKSSVRLLIRKVQHAPRDMGPQPRAEASWQFFMSDKPLRLAVSLSKEIYYHGEPIPVTVAVTNSTEKTVKKIKVLVEQVTNVVLY 
           __________________________________________175___________________________________________________________________________ 

           _________________________________________294_________________________322______________________________________           
 4zrg(A) : SSDYYIKTVAAEEAQEKVPPNSSLTKTLTLVPLLANNRERRGIALDGKIKHEDTNLASSTIIKEGIDKTVMGILVSYQIKVKLTVSGLLGELTSSEVATEVPFRLMHPQP           
         :                                                                                                                          
 4j2q(A) : SSDYYIKTVAAEEAQEKVPPNSSLTKTLTLVPLLANNRERRGIALDGKIKHEDTNLASSTIIKEGIDKTVMGILVSYQIKVKLTVSGLl---TSSEVATEVPFRLMHPQP           
           _________________________________________294_________________________322______________________________________           

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		18.1
Translation
(A) 		-1.3
Closure
(%) 		22.9
Bending Residues
( green ) 		  175 - 176
  294 - 304
  322 - 325
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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