Thioredoxin Reductase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Thioredoxin Reductase
  Conformer 1
(PDB) 		2zbw (A)
  Conformer 2
(PDB) 		2zbw (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 197 0.27   6 - 123   253 - 333
2 128 0.54   124 - 252

Sequence


           _____________________________________________________________________________________________________________________122 
 2zbw(A) : *ADHTDVLIVGAGPTGLFAGFYVGrGLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPFNPVYSLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVGAF 
         :                                                                                                                          
 2zbw(B) : AADHTDVLIVGAGPTGLFAGFYVGrGLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPFNPVYSLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVGAF 
           _____________________________________________________________________________________________________________________122 

           ________________________________________________________________________________________________________________________ 
 2zbw(A) : EPRRIGAPGEREFEGRGVYYAVKSKAEFQGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRAHEASVKELkAHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQEELALEVDA 
         :                                                                                                                          
 2zbw(B) : EPRRIGAPGEREFEGRGVYYAVKSKAEFQGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRAHEASVKELkAHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQEELALEVDA 
           ________________________________________________________________________________________________________________________ 

           ____250____________________________________________________________________________________                              
 2zbw(A) : VLILAGYITKLGPLANWGLALEKNKIKVDTTaTSIPGVYACGDIVTYPGKLPLIVLGFGEAAIAANHAAAYANPALKVNPGHSSEKAAPGT                              
         :                                                                                                                          
 2zbw(B) : VLILAGYITKLGPLANWGLALEKNKIKVDTTaTSIPGVYACGDIVTYPGKLPLIVLGFGEAAIAANHAAAYANPALKVNPGHSSEKAAPGT                              
           ____250____________________________________________________________________________________                              

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		25.0
Translation
(A) 		0.3
Closure
(%) 		58.6
Bending Residues
( green ) 		  122 - 126
  250 - 261
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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