Actin Interacting Protein 1

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Actin Interacting Protein 1
  Conformer 1
(PDB)
1nr0 (A)
  Conformer 2
(PDB)
1pev (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 332 0.35   12 - 328   360 - 368   370 - 373   383 - 383   580 - 580
2 274 0.62   4 - 11   329 - 359   369 - 369   374 - 382   384 - 579   581 - 609

Sequence


           ________11______________________________________________________________________________________________________________ 
 1nr0(A) : SEFSQTALFPSLPRTARGTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAV 
         :                                                                                                                          
 1pev(A) : SEFSQTALFPSLPRTARGTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAV 
           ________11______________________________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 1nr0(A) : GEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGS 
         :                                                                                                                          
 1pev(A) : GEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGS 
           ________________________________________________________________________________________________________________________ 

           ____________________________________________________________________________________328____________________________359__ 
 1nr0(A) : VFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRV 
         :                                                                                                                          
 1pev(A) : VFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRV 
           ____________________________________________________________________________________328____________________________359__ 

           ____368__373____380_____________________________________________________________________________________________________ 
 1nr0(A) : FPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGAS 
         :                                                                                                                          
 1pev(A) : FPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGAS 
           ____368__373____380_____________________________________________________________________________________________________ 

           _______________________________________________________________________________________________579______________________ 
 1nr0(A) : VSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQD 
         :                                                                                                                          
 1pev(A) : VSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQD 
           _______________________________________________________________________________________________579______________________ 

           __________                                                                                                               
 1nr0(A) : SNIKFWNVPF                                                                                                               
         :                                                                                                                          
 1pev(A) : SNIKFWNVPF                                                                                                               
           __________                                                                                                               

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
4.9
Translation
(A)
0.1
Closure
(%)
7.7
Bending Residues
( green )
  11 - 12
  328 - 329
  359 - 360
  368 - 370
  373 - 374
  380 - 384
  579 - 581
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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