Beta-Catenin Armadillo Repeat Region

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Beta-Catenin Armadillo Repeat Region
  Conformer 1
(PDB)
2bct  
  Conformer 2
(PDB)
1t08 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 126 0.46   239 - 244   256 - 257   272 - 388   396 - 396
2 110 0.52   154 - 238   245 - 255   258 - 271
3 254 0.56   390 - 391   397 - 662

Sequence


           __________________________________________________________________________________________238___244________255__________ 
 2bct    : ****TRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLH 
         :                                                                                                                          
 1t08(A) : AELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLH 
           __________________________________________________________________________________________238___244________255__________ 

           ___271__________________________________________________________________________________________________________________ 
 2bct    : QEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTL 
         :                                                                                                                          
 1t08(A) : QEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTL 
           ___271__________________________________________________________________________________________________________________ 

           388_____________________________________________________________________________________________________________________ 
 2bct    : RNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWP 
         :                                                                                                                          
 1t08(A) : RNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWP 
           388_____________________________________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 2bct    : LIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQR-----vRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAE 
         :                                                                                                                          
 1t08(A) : LIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQRqFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAE 
           ________________________________________________________________________________________________________________________ 

           _______________________________                                                                                          
 2bct    : GATAPLTELLHSRNEGVATYAAAVLFRMSED                                                                                          
         :                                                                                                                          
 1t08(A) : GATAPLTELLHSRNEGVATYAAAVLFRMSE*                                                                                          
           _______________________________                                                                                          

Morph

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Status: Initialising

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
6.9
Translation
(A)
-0.3
Closure
(%)
99.4
Bending Residues
( green )
  238 - 239
  244 - 245
  255 - 258
  271 - 272
Bending Region Analysis
Property Value
Fixed Domain
( blue )
1
Moving Domain
( yellow )
3
Rotation Angle
(deg)
9.2
Translation
(A)
0.2
Closure
(%)
29.7
Bending Residues
( green )
  388 - 398
Bending Region Analysis

Dynamic Contact Graph

The dynamic contact graph is still being generated. Progress: Initialising

PyMOL Script

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