Adenylylsulfate Kinase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Adenylylsulfate Kinase
  Conformer 1
(PDB)
1m7h (C)
  Conformer 2
(PDB)
1m7g (C)
  Window Length 7
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 176 1.05   25 - 122   129 - 206
2 22 6.8   9 - 24   123 - 128

Sequence


           _____________________24______________________________________________________________________________________________121 
 1m7h(C) : ****TFHASALTRSERTELRNQRGLTIWLTGLSASGKSTLAVELEHQLVRDRRVHAYRLDGDNIRFGLNKDLGFSEADRNENIRRIAEVAKLFADSNSIAITSFISPYRKDRDTARQLHE 
         :                                                                                                                          
 1m7g(C) : STNITFHASALTRSERTELRNQRGLTIWLTGLSASGKSTLAVELEHQLVRDRRVHAYRLDGDNIRFGLNKDLGFSEADRNENIRRIAEVAKLFADSNSIAITSFISPYRKDRDTARQLHE 
           _____________________24______________________________________________________________________________________________121 

           ____128__________________________________________________________________________________                                
 1m7h(C) : VATPGEETGLPFVEVYVDVPVEVAEQRDPKGLYKKAREGVIKEFTGISAPYEAPANPEVHVKNYELPVQDAVKQIIDYLDTKGYLPAK*                                
         :                                                                                                                          
 1m7g(C) : VATPGEETGLPFVEVYVDVPVEVAEQRDPKGLYKKAREGVIKEFTGISAPYEAPANPEVHVKNYELPVQDAVKQIIDYLDTKGYLPAKK                                
           ____128__________________________________________________________________________________                                

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
126.1
Translation
(A)
1.6
Closure
(%)
99.6
Bending Residues
( green )
  24 - 27
  121 - 123
  128 - 131
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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