Chemotaxis Protein Chea

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Chemotaxis Protein Chea
  Conformer 1
(PDB)
1b3q (A)
  Conformer 2
(PDB)
2ch4 (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 170 1.05   355 - 538
2 131 1.51   539 - 669

Sequence


           ________________________________________________________________________________________________________________________ 
 1b3q(A) : SQTVRVDIEKLDNLMDLMGELVIARSRILETLKKYNIKELDESLSHLSRITLDLQNVVMKIRMVPISFVFNRFPRMVRDLAKKMNKEVNFIMRGEDTELDRTFVEEIGEPLLHLLRNAID 
         :                                                                                                                          
 2ch4(B) : ************************************************************SHMVPISFVFNRFPRMVRDLAKKMNKEVNFIMRGEDTELDRTFVEEIGEPLLHLLRNAID 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________538_____ 
 1b3q(A) : HGIEPKEERIAKGKPPIGTLILSARHEGNNVVIEVEDDGRGIDKEKIIRKAIEKGLIDESKAATLSDQEILNFLFVPGFSgVGMDVVKNVVESLNGSMGIESEKDKGTKVTIRLPLTLAI 
         :                                                                                                                          
 2ch4(B) : HGIEPKEERIAKGKPPIGTLILSARHEGNNVVIEVEDDGRGIDKEKIIRKAIEKGLIDESKAATLSDQEILNFLFVPGFS---mDVVKNVVESLNGSISIESEKDKGTKVTIRLPLTLAI 
           ________________________________________________________________________________________________________________538_____ 

           ________________________________________________________________________________________________________________________ 
 1b3q(A) : ICALLVKVNNLVYAIPIANIDTILSISKEDIQRVQDRDVIVIRGEVIPVYRLWEVLQIEHKEELEEMEAVIVRVGNRKYGIVVDDLLGQDDIVIKSLGKVFSEVKEFSGAAILGDGSIAL 
         :                                                                                                                          
 2ch4(B) : IQALLVKVNNLVYAIPIANIDTILSISKEDIQRVQDRDVIVIRGEVIPVYRLWEVLQIEHKEELEEMEAVIVRVGNRKYGIVVDDLLGQDDIVIKSLGKVFSEVKEFSGAAILGDGSIAL 
           ________________________________________________________________________________________________________________________ 

           ________                                                                                                                 
 1b3q(A) : IINVSGIV                                                                                                                 
         :                                                                                                                          
 2ch4(B) : IINVSGIV                                                                                                                 
           ________                                                                                                                 

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
46.1
Translation
(A)
-1.8
Closure
(%)
98.4
Bending Residues
( green )
  538 - 539
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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