Chemotaxis Receptor Methyltransferase Cher

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Chemotaxis Receptor Methyltransferase Cher
  Conformer 1
(PDB)
1af7  
  Conformer 2
(PDB)
1bc5 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 43 0.49   45 - 87
2 24 0.25   21 - 44
3 195 0.45   88 - 282

Sequence


           _______________________________43_________________________________________86____________________________________________ 
 1af7    : SVLLQMTQRLALSDAHFRRICQLIYQRAGIVLADHKRDMVYNRLVRRLRALGLDDFGRYLSMLEANQNSAEWQAFINALTTNLTAFFREAHHFPILAEHARRRHGEYRVWSAAASTGEEP 
         :                                                                                                                          
 1bc5(A) : *****MTQRLALSDAHFRRICQLIYQRAGIVLADHKRDMVYNRLVRRLRALGLDDFGRYLSMLEANQNSAEWQAFINALTTNLTAFFREAHHFPILAEHARRRHGEYRVWSAAASTGEEP 
           _______________________________43_________________________________________86____________________________________________ 

           ________________________________________________________________________________________________________________________ 
 1af7    : YSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGLVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVP 
         :                                                                                                                          
 1bc5(A) : YSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGLVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVP 
           ________________________________________________________________________________________________________________________ 

           __________________________________                                                                                       
 1af7    : LLKPDGLLFAGHSENFSNLVREFSLRGQTVYALS                                                                                       
         :                                                                                                                          
 1bc5(A) : LLKPDGLLFAGHSENFSNLVREFSLRGQTVYALS                                                                                       
           __________________________________                                                                                       

Morph

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Status: Initialising

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
5.7
Translation
(A)
0.2
Closure
(%)
15.8
Bending Residues
( green )
  43 - 45
Bending Region Analysis
Property Value
Fixed Domain
( blue )
1
Moving Domain
( yellow )
3
Rotation Angle
(deg)
11.2
Translation
(A)
-0.6
Closure
(%)
50.3
Bending Residues
( green )
  86 - 88
Bending Region Analysis

Dynamic Contact Graph

The dynamic contact graph is still being generated. Progress: Initialising

PyMOL Script

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