Aspartokinase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Aspartokinase
  Conformer 1
(PDB)
2dt9 (B)
  Conformer 2
(PDB)
2zho (F)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 74 1.08   16 - 93
2 70 0.8   8 - 15   94 - 155

Sequence


           _________15____________________________________________________________________________93_______________________________ 
 2dt9(B) : KAVTGVALDLDHAQIGLIGIPDQPGIAAKVFQALAERGIAVDMIIQGVPGHDPSRQQMAFTVKKDFAQEALEALEPVLAEIGGEAILRPDIAKVSIVGVGLASTPEVPAKMFQAVASTGA 
         :                                                                                                                          
 2zho(F) : *AVTGVALDLDHAQIGLIGIPDQPGIAAKVFQALAERGIAVDMIIQGVp----SRQQMAFTVKKDFAQEALEALEPVLAEIGGEAILRPDIAKVSIVGVGLASTPEVPAKMFQAVASTGA 
           _________15____________________________________________________________________________93_______________________________ 

           _________________________________                                                                                        
 2dt9(B) : NIEMIATSEVRISVIIPAEYAEAALRAVHQAFE                                                                                        
         :                                                                                                                          
 2zho(F) : NIEMIATSEVRISVIIPAEYAEAALRAVHQAFE                                                                                        
           _________________________________                                                                                        

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
12.9
Translation
(A)
-1.3
Closure
(%)
45.7
Bending Residues
( green )
  15 - 16
  93 - 96
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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