Bbcrasp-1

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Bbcrasp-1
  Conformer 1
(PDB)
1w33 (A)
  Conformer 2
(PDB)
4bl4 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 105 0.28   86 - 88   91 - 172   207 - 226
2 50 0.31   72 - 85   89 - 90   173 - 206
3 21 0.21   227 - 247

Sequence


           _____________84_____________________________________________________________________________________172_________________ 
 1w33(A) : ETIASELKAIGKELEDQKKEENIQIAKIAKEKFDFLSTFKVGPYDLIDEDIQMKIKRTLYSSLDYKKENIEKLKEILEILKKNSEHYNIIGRLIYHISWGIQFQIEQNLELIQNGVENLS 
         :                                                                                                                          
 4bl4(A) : ETIASELKAIGKELEDQKKEENIQIAKIAKEKFDFLSTFKVGPYDLIDEDIQMKIKRTLYSSLDYKKENIEKLKEILEILKKNSEHYNIIGRLIYHISWGIQFQIEQNLELIQNGVENLS 
           _____________84_____________________________________________________________________________________172_________________ 

           ______________206________________225_________________________                                                            
 1w33(A) : QEESKSLLMQIKSNLEIKQRLKKTLNETLKVYNQNTQDNEKILAEHFNKYYKDFDTLKPAF                                                            
         :                                                                                                                          
 4bl4(A) : QEESKSLLMQIKSNLEIKQRLKKTLNETLKVYNQNTQDNEKILAEHFNKYYKDFDTLKPA*                                                            
           ______________206________________225_________________________                                                            

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
3.4
Translation
(A)
0.1
Closure
(%)
75.6
Bending Residues
( green )
  84 - 91
  172 - 173
  206 - 207
Bending Region Analysis
Property Value
Fixed Domain
( blue )
1
Moving Domain
( yellow )
3
Rotation Angle
(deg)
15.3
Translation
(A)
-0.1
Closure
(%)
100.0
Bending Residues
( green )
  225 - 227
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Mixed

Conformer 1 Contact:
Residue 1 ———› Residue 3

Conformer 2 Contact:
Residue 3 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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