Camphor 5-Monooxygenase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Camphor 5-Monooxygenase
  Conformer 1
(PDB)
3l61 (A)
  Conformer 2
(PDB)
3l63 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 290 0.66   12 - 113   115 - 115   118 - 126   133 - 158   252 - 412
2 102 1.29   114 - 114   116 - 117   127 - 132   159 - 251

Sequence


           _____________________________________________________________________________________________________113______122_______ 
 3l61(A) : NLAPLPPHVPEHLVFDFDMYNPSNLSAGVQEAWAVLQESNVPDLVWTRCNGGHWIATRGQLIREAYEDYRHFSSECPFIP--------fIPTSM-pPEQRQFRALANQVVGMPVVDKLEN 
         :                                                                                                                          
 3l63(A) : NLAPLPPHVPEHLVFDFDMYNPSNLSAGVQEAWAVLQESNVPDLVWTRCNGGHWIATRGQLIREAYEDYRHFSSECPFIPREAGEAYDFIPTSMDPPEQRQFRALANQVVGMPVVDKLEN 
           _____________________________________________________________________________________________________113______122_______ 

           132_____________________156____________________________________________________________________________________________2 
 3l61(A) : RIQELACSLIESLRPQGQCNFTEDYAEPFPIRIFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAISIVANGQVNGRPITSDEAKRMCGLLLVGG 
         :                                                                                                                          
 3l63(A) : RIQELACSLIESLRPQGQCNFTEDYAEPFPIRIFMLLAGLPEEDIPHLKYLTDQMTRPDGSMTFAEAKEALYDYLIPIIEQRRQKPGTDAISIVANGQVNGRPITSDEAKRMCGLLLVGG 
           132_____________________156____________________________________________________________________________________________2 

           51______________________________________________________________________________________________________________________ 
 3l61(A) : LDTVVNFLSFSMEFLAKSPEHRQELIERPERIPAACEELLRRFSLVADGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENAAPMHVDFSRQKVSHTTFGHGSHLCLGQHLARREIIV 
         :                                                                                                                          
 3l63(A) : LDTVVNFLSFSMEFLAKSPEHRQELIERPERIPAACEELLRRFSLVADGRILTSDYEFHGVQLKKGDQILLPQMLSGLDERENAAPMHVDFSRQKVSHTTFGHGSHLCLGQHLARREIIV 
           51______________________________________________________________________________________________________________________ 

           _____________________________________________                                                                            
 3l61(A) : TLKEWLTRIPDFSIAPGAQIQHKSGIVSGVQALPLVWDPATTKAV                                                                            
         :                                                                                                                          
 3l63(A) : TLKEWLTRIPDFSIAPGAQIQHKSGIVSGVQALPLVWDPATTKAV                                                                            
           _____________________________________________                                                                            

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
14.4
Translation
(A)
-0.3
Closure
(%)
83.0
Bending Residues
( green )
  113 - 118
  122 - 128
  132 - 135
  156 - 159
  251 - 252
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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