Complement Control Protein

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Complement Control Protein
  Conformer 1
(PDB)
1g40 (A)
  Conformer 2
(PDB)
1rid (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 184 1.24   3 - 184   207 - 208
2 55 1.53   185 - 206   209 - 241

Sequence


           ________________________________________________________________________________________________________________________ 
 1g40(A) : CCTIPSRPINMKFKNSVETDANANYNIGDTIEYLCLPGYRKQKMGPIYAKCTGTGWTLFNQCIKRRCPSPRDIDNGQLDIGGVDFGSSITYSCNSGYHLIGESKSYCELGSTGSMVWNPE 
         :                                                                                                                          
 1rid(A) : CCTIPSRPINMKFKNSVETDANANYNIGDTIEYLCLPGYRKQKMGPIYAKCTGTGWTLFNQCIKRRCPSPRDIDNGQLDIGGVDFGSSITYSCNSGYHLIGESKSYCELGSTGSMVWNPE 
           ________________________________________________________________________________________________________________________ 

           _____________________________________________________________184___________________206__________________________________ 
 1g40(A) : APICESVKCQSPPSISNGRHNGYEDFYTDGSVVTYSCNSGYSLIGNSGVLCSGGEWSDPPTCQIVKCPHPTISNGYLSSGFKRSYSYNDNVDFKCKYGYKLSGSSSSTCSPGNTWKPELP 
         :                                                                                                                          
 1rid(A) : APICESVKCQSPPSISNGRHNGYEDFYTDGSVVTYSCNSGYSLIGNSGVLCSGGEWSDPPTCQIVKCPHPTISNGYLSSGFKRSYSYNDNVDFKCKYGYKLSGSSSSTCSPGNTWKPELP 
           _____________________________________________________________184___________________206__________________________________ 

           ____                                                                                                                     
 1g40(A) : KCV*                                                                                                                     
         :                                                                                                                          
 1rid(A) : KCVR                                                                                                                     
           ____                                                                                                                     

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
29.7
Translation
(A)
-2.6
Closure
(%)
99.9
Bending Residues
( green )
  184 - 185
  206 - 212
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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