Fusion Protein Beta-2 Adrenergic Receptor/lysozyme

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Fusion Protein Beta-2 Adrenergic Receptor/lysozyme
  Conformer 1
(PDB)
3pds (A)
  Conformer 2
(PDB)
3p0g (A)
  Window Length 9
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 220 1.57   41 - 205   284 - 338
2 26 1.39   206 - 269

Sequence


           ________________________________________________________________________________________________________________________ 
 3pds(A) : ******DEVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAACILMKMWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQ 
         :                                                                                                                          
 3p0g(A) : DVTQQRDEVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQ 
           ________________________________________________________________________________________________________________________ 

           ____________________________________________________________205_________________________________________________________ 
 3pds(A) : SLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAEETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLL 
         :                                                                                                                          
 3p0g(A) : SLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQEAINCYAEETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAK----------------------------------- 
           ____________________________________________________________205_________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 3pds(A) : TKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTF 
         :                                                                                                                          
 3p0g(A) : ------------------------------------------------------------------------------------------------------------------------ 
           ________________________________________________________________________________________________________________________ 

           ____________269___________________________________________________________________________                               
 3pds(A) : RTGTWDAYKFCLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPLIYCRSPDFRIAFQELLCL**                               
         :                                                                                                                          
 3p0g(A) : -----------lKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPLIYCRSPDFRIAFQELLCLRR                               
           ____________269___________________________________________________________________________                               

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
27.6
Translation
(A)
0.6
Closure
(%)
14.9
Bending Residues
( green )
  205 - 207
  269 - 287
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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