Glucose 6-Phosphate 1-Dehydrogenase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Glucose 6-Phosphate 1-Dehydrogenase
  Conformer 1
(PDB)
1h9a (A)
  Conformer 2
(PDB)
1h94 (A)
  Window Length 7
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 308 0.36   4 - 4   146 - 167   169 - 174   185 - 406   423 - 433   437 - 482
2 171 0.44   5 - 145   168 - 168   175 - 184   407 - 422   434 - 436

Sequence


           ___4____________________________________________________________________________________________________________________ 
 1h9a(A) : VSEIKTLVTFFGGTGDLAKRKLYPSVFNLYKKGYLQKHFAIVGTARQALNDDEFKQLVRDSIKDFTDDQAQAEAFIEHFSYRAHDVTDAASYAVLKEAIEEAADKFDIDGNRIFYMSVAP 
         :                                                                                                                          
 1h94(A) : VSEIKTLVTFFGGTGDLAKRKLYPSVFNLYKKGYLQKHFAIVGTARQALNDDEFKQLVRDSIKDFTDDQAQAEAFIEHFSYRAHDVTDAASYAVLKEAIEEAADKFDIDGNRIFYMSVAP 
           ___4____________________________________________________________________________________________________________________ 

           ______________________145_________________165______174_______184________________________________________________________ 
 1h9a(A) : RFFGTIAKYLKSEGLLADTGYNRLMIEKPFGTSYDTAAELQNDLENAFDDNQLFRIDHYLGKEMVQNIAALRFGNPIFDAAWNKDYIKNVQVTLSEVLGVEERAGYYDTAGALLDMIQNH 
         :                                                                                                                          
 1h94(A) : RFFGTIAKYLKSEGLLADTGYNRLMIEKPFGTSYDTAAELQNDLENAFDDNQLFRIDHYLGKEMVQNIAALRFGNPIFDAAWNKDYIKNVQVTLCEVLGVEERAGYYDTAGALLDMIQNH 
           ______________________145_________________165______174_______184________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 1h9a(A) : TMQIVGWLAMEKPESFTDKDIRAAKNAAFNALKIYDEAEVNKYFVRAQYGAGDSADFKPYLEELDVPADSKNNTFIAGELQFDLPRWEGVPFYVRSGKRLAAKQTRVDIVFKAGTFNFGS 
         :                                                                                                                          
 1h94(A) : TMQIVGWLAMEKPESFTDKDIRAAKNAAFNALKIYDEAEVNKYFVRAQYGAGDSADFKPYLEELDVPADSKNNTFIAGELQFDLPRWEGVPFYVRSGKRLAAKQTRVDIVFKAGTFNFGS 
           ________________________________________________________________________________________________________________________ 

           ___________________________________________406_____________422________433_______________________________________________ 
 1h9a(A) : EQEACEAVLSIIIDPKGAIELKLNAKSVEDAFNTRTIDLGWTVSDEDKKNTPEPYERMIHDTMNGDGSNFADWNGVSIAWKFVDAISAVYTADKAPLETYKSGSMGPEASDKLLAANGDA 
         :                                                                                                                          
 1h94(A) : EQEAQEAVLSIIIDPKGAIELKLNAKSVEDAFNTRTIDLGWTVSDEDKKNTPEPYERMIHDTMNGDGSNFADWNGVSIAWKFVDAISAVYTADKAPLETYKSGSMGPEASDKLLAANGDA 
           ___________________________________________406_____________422________433_______________________________________________ 

           _____                                                                                                                    
 1h9a(A) : WVFKG                                                                                                                    
         :                                                                                                                          
 1h94(A) : WVFKG                                                                                                                    
           _____                                                                                                                    

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
3.8
Translation
(A)
-0.1
Closure
(%)
55.4
Bending Residues
( green )
  4 - 5
  145 - 146
  165 - 169
  174 - 175
  184 - 185
  406 - 408
  422 - 423
  433 - 434
  436 - 437
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

Download and extract PyMOL PML script file Download