Angiostatin

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Angiostatin
  Conformer 1
(PDB)
1ki0 (A)
  Conformer 2
(PDB)
2doi (X)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 84 2.05   163 - 246
2 80 0.55   83 - 162

Sequence


           _____________________________________________________________________________160________________________________________ 
 1ki0(A) : LSECKTGNGKNYRGTMSKTKNGITCQKWSSTSPHRPRFSPATHPSEGLEENYCRNPDNDPQGPWCYTTDPEKRYDYCDILECEEECMHCSGENYDGKISKTMSGLECQAWDSQSPHAHGY 
         :                                                                                                                          
 2doi(X) : LSECKTGNGKNYRGTMSKTKNGITCQKWSSTSPHRPRFSPATHPSEGLEENYCRNPDNDPQGPWCYTTDPEKRYDYCDILECEEECMHCSGENYDGKISKTMSGLECQAWDSQSPHAHGY 
           _____________________________________________________________________________160________________________________________ 

           ________________________________________________________________________________________________________________________ 
 1ki0(A) : IPSKFPNKNLKKNYCRNPDRELRPWCFTTDPNKRWELCDIPRCTTPPPSSGPTYQCLKGTGENYRGNVAVTVSGHTCQHWSAQTPHTHERTPENFPCKNLDENYCRNPDGKRAPWCHTTN 
         :                                                                                                                          
 2doi(X) : IPSKFPNKNLKKNYCRNPDRELRPWCFTTDPNKRWELCDIPRCTTpCK************************************************************************ 
           ________________________________________________________________________________________________________________________ 

           _____________                                                                                                            
 1ki0(A) : SQVRWEYCKIPSC                                                                                                            
         :                                                                                                                          
 2doi(X) : *************                                                                                                            
           _____________                                                                                                            

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
51.1
Translation
(A)
0.6
Closure
(%)
4.7
Bending Residues
( green )
  160 - 165
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

Download and extract PyMOL PML script file Download