Annexin III

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Annexin III
  Conformer 1
(PDB)
1axn  
  Conformer 2
(PDB)
2ran  
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 161 0.76   12 - 96   124 - 125   245 - 247   250 - 320
2 148 1.14   97 - 123   126 - 244   248 - 249

Sequence


           _____________________________________________________________________________________________96________________________1 
 1axn    : SASIWVGHRGTVRDYPDFSPSVDAEAIQKAIRGIGTDEKMLISILTERSNAQRQLIVKEYQAAYGKELKDDLKGDLSGHFEHLMVALVTPPAVFDAKQLKKSMKGAGTNEDALIEILTTR 
         :                                                                                                                          
 2ran    : ******ALRGTVTDFSGFDGRADAEVLRKAMKGLGTDEDSILNLLTARSNAQRQQIAEEFKTLFGRDLVNDMKSELTGKFEKLIVALMKPSRLYDAYELKHALKGAGTDEKVLTEIIASR 
           _____________________________________________________________________________________________90________________________1 

           23______________________________________________________________________________________________________________________ 
 1axn    : TSRQMKDISQAYYTVYKKSLGDDISSETSGDFRKALLTLADGRRDESLKVDEHLAKQDAQILYKAGENRWGTDEDKFTEILCLRSFPQLKLTFDEYRNISQKDIVDSIKGELSGHFEDLL 
         :                                                                                                                          
 2ran    : TPEELRAIKQAYEEEYGSNLEDDVVGDTSGYYQRMLVVLLQANRDPDTAIDDAQVELDAQALFQAGELKWGTDEEKFITILGTRSVSHLRRVFDKYMTISGFQIEETIDRETSGNLENLL 
           17______________________________________________________________________________________________________________________ 

           244________________________________________________________________________________                                      
 1axn    : LAIVNCVRNTPAFLAERLHRALKGIGTDEFTLNRIMVSRSEIDLLDIRTEFKKHYGYSLYSAIKSDTSGDYEITLLKICGGDD                                      
         :                                                                                                                          
 2ran    : LAVVKSIRSIPAYLAETLYYAMKGAGTDDHTLIRVIVSRSEIDLFNIRKEFRKNFATSLYSMIKGDTSGDYKKALLLLCGGE*                                      
           238________________________________________________________________________________                                      

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
12.7
Translation
(A)
0.0
Closure
(%)
62.9
Bending Residues
( green )
  96 - 97
  123 - 126
  244 - 250
Bending Region Analysis

Dynamic Contact Graph

The dynamic contact graph is still being generated. Progress: Initialising

PyMOL Script

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