Bifunctional P-450/nadph-P450 Reductase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Bifunctional P-450/nadph-P450 Reductase
  Conformer 1
(PDB)
4kf2 (A)
  Conformer 2
(PDB)
3ekd (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 406 1.07   5 - 173   216 - 455
2 40 0.74   174 - 215

Sequence


           ________________________________________________________________________________________________________________________ 
 4kf2(A) : **KEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNLSQALKFVRDFFGDGLVTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMV 
         :                                                                                                                          
 3ekd(A) : TIKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNLSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMV 
           ________________________________________________________________________________________________________________________ 

           ____________________________________________167__________________________________________212____________________________ 
 4kf2(A) : DIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRA--dDPAYDENKRQFQEDIKVMNDLVDKIIADRKASqSDDLLTHMLNGKD 
         :                                                                                                                          
 3ekd(A) : DIAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKAS-sDDLLTHMLNGKD 
           ____________________________________________167__________________________________________212____________________________ 

           ________________________________________________________________________________________________________________________ 
 4kf2(A) : PETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 
         :                                                                                                                          
 3ekd(A) : PETGEPLDDENIRYQIITFLIMGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHR 
           ________________________________________________________________________________________________________________________ 

           _______________________________________________________________________________________________                          
 4kf2(A) : DKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGG                          
         :                                                                                                                          
 3ekd(A) : DKTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGG                          
           _______________________________________________________________________________________________                          

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
22.8
Translation
(A)
1.9
Closure
(%)
99.9
Bending Residues
( green )
  167 - 175
  212 - 231
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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