Chloride Intracellular Channel Protein 1

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Chloride Intracellular Channel Protein 1
  Conformer 1
(PDB)
1k0n (A)
  Conformer 2
(PDB)
1rk4 (A)
  Window Length 15
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 152 2.51   29 - 44   82 - 227
2 24 6.14   45 - 68

Sequence


           ____________________________35_______________________________68_________________________________________________________ 
 1k0n(A) : PQVELFVKAGSDGAKIGNCPFSQRLFMVLWLKGVTFNVTTVDTKRRTETVQKLCPGGELPFLLYGTEVHTDTNKIEEFLEAVLCPPRYPKLAALNPESNTAGLDIFAKFSAYIKNSNPAL 
         :                                                                                                                          
 1rk4(A) : ****************GNCPFSQRLFMVLWLKGVTFNVTTVDTKRRTETVQKLCPGGQLPFLLYGTEVHTDTNKIEEFLEAVLCPPRYPKLAALNPESNTAGLDIFAKFSAYIKNSNPAL 
           ____________________________35_______________________________68_________________________________________________________ 

           ____________________________________________________________________________________________________________________     
 1k0n(A) : NDNLEKGLLKALKVLDNYLTSPLPE----------GVsQRKFLDGNELTLADCNLLPKLHIVQVVCKKYRGFTIPEAFRGVHRYLSNAYAREEFASTCPDDEEIELAYEQVAKALK     
         :                                                                                                                          
 1rk4(A) : NDNLEKGLLKALKVLDNYLTSPLPEEVDETSAEDEGVSQRKFLDGNELTLADCNLLPKLHIVQVVCKKYRGFTIPEAFRGVHRYLSNAYAREEFASTCPDDEEIELAYE*******     
           ____________________________________________________________________________________________________________________     

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
68.4
Translation
(A)
-9.0
Closure
(%)
14.1
Bending Residues
( green )
  35 - 45
  68 - 82
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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