Creatine Kinase B-Type

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Creatine Kinase B-Type
  Conformer 1
(PDB)
3dre (B)
  Conformer 2
(PDB)
3b6r (A)
  Window Length 7
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 341 0.74   9 - 174   195 - 378
2 20 0.4   175 - 194

Sequence


           ________________________________________________________________________________________________________________________ 
 3dre(B) : NSHNALKLRFPAEDEFPDLSAHNNHMAKVLTPELYAELRAKSTPSGFTLDDVIQTGVDNPGHPYIMTVGCVAGDEESYEVFKDLFDPIIEDRHGGYKPSDEHKTDLNPDNLQGGDDLDPN 
         :                                                                                                                          
 3b6r(A) : *SHNALKLRFPAEDEFPDLSAHNNHMAKVLTPELYAELRAKSTPSGFTLDDVIQTGVDNPGHPYIMTVGCVAGDEESYEVFKDLFDPIIEDRHGGYKPSDEHKTDLNPDNLQGGDDLDPN 
           ________________________________________________________________________________________________________________________ 

           _______________________________________________174_______________192____________________________________________________ 
 3dre(B) : YVLSSRVRTGRSIRGFCLPPHCSRGERRAIEKLAVEALSSLDGDLAGRYYALKSMTEAEQQQLIDDHFLFDKPVSPLLLASGMARDWPDARGIWHNDNKTFLVWVNEEDHLRVISMQKGG 
         :                                                                                                                          
 3b6r(A) : YVLSSRVRTGRSIRGFCLPPHCSRGERRAIEKLAVEALSSLDGDLAGRYYALKSMTEAEQQQLIDDHFLFDKPVSPLLLASGMARDWPDARGIWHNDNKTFLVWVNEEDHLRVISMQKGG 
           _______________________________________________174_______________192____________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 3dre(B) : NMKEVFTRFCTGLTQIETLFKSKDYEFMWNPHLGYILTCPSNLGTGLRAGVHIKLPNLGKHEKFSEVLKRLRLQKR---------vGGVFDVSNADRLGFSEVELVQMVVDGVKLLIEME 
         :                                                                                                                          
 3b6r(A) : NMKEVFTRFCTGLTQIETLFKSKDYEFMWNPHLGYILTCPSNLGTGLRAGVHIKLPNLGKHEKFSEVLKRLRLQKRGTGGVDTAAVGGVFDVSNADRLGFSEVELVQMVVDGVKLLIEME 
           ________________________________________________________________________________________________________________________ 

           _________________                                                                                                        
 3dre(B) : QRLEQGQAIDDLMPAQK                                                                                                        
         :                                                                                                                          
 3b6r(A) : QRLEQGQAIDDLMPAQK                                                                                                        
           _________________                                                                                                        

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
13.9
Translation
(A)
-0.4
Closure
(%)
93.5
Bending Residues
( green )
  174 - 175
  192 - 196
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Mixed

PyMOL Script

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