Dbh Protein

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Dbh Protein
  Conformer 1
(PDB)
1k1s (A)
  Conformer 2
(PDB)
1jx4 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 171 1.32   4 - 170   233 - 243
2 61 1.13   171 - 232
3 95 1.0   244 - 340

Sequence


           ________________________________________________________________________________________________________________________ 
 1k1s(A) : MIVIFVDFDYFFAQVEEVLNPQYKGKPLVVSVYSGt---SGAVATANYEARKLGVKAGMPIIKAMQIAPSAIYVPMRKPIYEAFSNRIMNLLNKHADKIEVASIDEAYLDVTNKVEGNFE 
         :                                                                                                                          
 1jx4(A) : *IVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDSGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLP-rKEVYQQVSSRI-nLLREYSEKIEIASIDEAYLDISDKVR-DYR 
           ________________________________________________________________________________________________________________________ 

           ___________________________________________166_______________________________________________________________232_____240 
 1k1s(A) : NGIELARKIKQEILEKEKITVTVGVAPNKILAKIIADKSKPNGLGVIRPTEVQDFLNELDIDEIPGIGSVLARRLNELGIQKLRDILSKNYNELEKITGKAKALYLLKLAQNKYSEPVEN 
         :                                                                                                                          
 1jx4(A) : EAYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAAD-aKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGi-GEAKAKYLISLARDEYNEPIRT 
           ___________________________________________165_______________________________________________________________231_____239 

           _________________________________________________________________________________________________________                
 1k1s(A) : KSKIPHGRYLTLPYNTRDVKVILPYLKKAINEAYNKVNG-IPMRITVIAIMEDLDILSKGKKFKHGISIDNAYKVAEDLLRELLVRDKRRNVRRIGVKLDNIIIN                
         :                                                                                                                          
 1jx4(A) : RVRKSIGRIVT-kRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQKILEEDERK-IRRIGVRFSKFI**                
           _________________________________________________________________________________________________________                

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
13.5
Translation
(A)
0.0
Closure
(%)
32.2
Bending Residues
( green )
  166 - 171
  232 - 233
Bending Region Analysis
Property Value
Fixed Domain
( blue )
1
Moving Domain
( yellow )
3
Rotation Angle
(deg)
63.6
Translation
(A)
-4.6
Closure
(%)
75.6
Bending Residues
( green )
  240 - 245
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Mixed

Conformer 1 Contact:
Residue 1 ———› Residue 3

Conformer 2 Contact:
Residue 3 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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