Probable 2-Dehydropantoate 2-Reductase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Probable 2-Dehydropantoate 2-Reductase
  Conformer 1
(PDB) 		5zik (A)
  Conformer 2
(PDB) 		6k1r (C)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 174 0.82   74 - 89   91 - 92   97 - 116   120 - 126   142 - 151   169 - 172   174 - 288
2 112 0.84   3 - 73   90 - 90   93 - 96   117 - 119   127 - 141   152 - 168   173 - 173

Sequence


           _________________________________________________________________________73______________89_____96_________________116__ 
 5zik(A) : **MTWHILGAGSLGSLWAARLGRAGLPVRLILRDRQRLRRYQQAGGLSLVEDGQASLYPIAAETPDGGQPIQRLLLACKAYDAEEAASSVAHRLAGNAELLLLQNGLGSQQAVAARLPRS 
         :                                                                                                                          
 6k1r(C) : SHMTWHILGAGSLGSLWAARLGRAGLPVRLILRDRQRLRRYQQAGGLSLVEDGQASLYPIAAETPDGGQPIQRLLLACKAYDAEEAASSVAHRLAGNAELLLLQNGLGSQQAVAARLPRS 
           _________________________________________________________________________73______________89_____96_________________116__ 

           _____126__________139_________151______________168_172__________________________________________________________________ 
 5zik(A) : RCLFASSTEGAFRDGDFRVVFAGRGHTWLGDPRDTNAPAWLTQLSQAGIPHSWSDDILERLWRKLALNCAINPLTVLHDCRNGGLRQHPEEIAALCDELGQLLHASGYDAAARSLLEDVR 
         :                                                                                                                          
 6k1r(C) : RCLFASSTEGAFRDGDFRVVFAGRGHTWLGDPRDTNAPAWLTQLSQAGIPHSWSDDILERLWRKLALNCAINPLTVLHDCRNGGLRQHPEEIAALCDELGQLLHASGYDAAARSLLEDVR 
           _____126__________139_________151______________168_172__________________________________________________________________ 

           _________________________________________________________________                                                        
 5zik(A) : AVIDATAANYSSMHQDVTRGRRTEIGYLLGYACQHGQRLGLPLPRLGTLLARLQAHLRQRGLPDR                                                        
         :                                                                                                                          
 6k1r(C) : AVIDATAANYSSMHQDVTRGRRTEIGYLLGYACQHGQRLGLPLPRLGTLLARLQAHLRQRGLPDR                                                        
           _________________________________________________________________                                                        

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		7.5
Translation
(A) 		0.0
Closure
(%) 		95.5
Bending Residues
( green ) 		  73 - 74
  89 - 93
  96 - 97
  116 - 117
  119 - 120
  126 - 127
  139 - 144
  151 - 152
  168 - 169
  172 - 174
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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