Sensor Protein Cpxa

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Sensor Protein Cpxa
  Conformer 1
(PDB) 		4biu (A)
  Conformer 2
(PDB) 		4biu (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 135 0.47   306 - 453
2 110 5.72   190 - 305

Sequence


           _______________________________________________________________________________________________________299______________ 
 4biu(A) : KPARKLKNAADEVAQGNLRQHPEeFLAAGASFNQMVTALERMMTSQQRLLSDISHELRTPLTRLQLGTALLRRRSGESKELERIETEAQRLDSMINDLLVMSRNQQKNALVSETIKANQL 
         :                                                                                                                          
 4biu(B) : KPARKLKNAADEVAQGNLRQHPEeFLAAGASFNQMVTALERMMTSQQRLLSDISHELRTPLTRLQLGTALLRRRSGESKELERIETEAQRLDSMINDLLVMSRNQQKNALVSETIKANQL 
           _______________________________________________________________________________________________________299______________ 

           ________________________________________________________________________________________________________________________ 
 4biu(A) : WSEVLDNAAFEAEQMGKSLTVNFPPGPWPLYGNPNALESALENIVRNALRYSHTKIEVGFAVDKDGITITVDDDGPGVSPEDREQIFRPFYRTDgLGLAIVETAIQQHRGWVKAEDSPLG 
         :                                                                                                                          
 4biu(B) : WSEVLDNAAFEAEQMGKSLTVNFPPGPWPLYGNPNALESALENIVRNALRYSHTKIEVGFAVDKDGITITVDDDGPGVSPEDREQIFRPFY---gLGLAIVETAIQQHRGWVKAEDSPLG 
           ________________________________________________________________________________________________________________________ 

           ____________                                                                                                             
 4biu(A) : GLRLVIWLPLYK                                                                                                             
         :                                                                                                                          
 4biu(B) : GLRLVIWLPLYK                                                                                                             
           ____________                                                                                                             

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		68.0
Translation
(A) 		6.4
Closure
(%) 		50.3
Bending Residues
( green ) 		  299 - 306
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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