Fkbp-Type Peptidyl-Prolyl Cis-Trans Isomerase Fkpa

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Fkbp-Type Peptidyl-Prolyl Cis-Trans Isomerase Fkpa
  Conformer 1
(PDB)
1q6u (A)
  Conformer 2
(PDB)
1q6h (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 135 0.76   87 - 222
2 69 0.78   17 - 86

Sequence


           _______________________________________________________________79_______________________________________________________ 
 1q6u(A) : AFKNDDQKSAYALGASLGRYMENSLKEQEKLGIKLDKDQLIAGVQDAFADKSKLSDQEIEQTLQAFEARVKSSAQAKMEKDAADNEAKGKEYREKFAKEKGVKTSSTGLVYQVVEAGKGE 
         :                                                                                                                          
 1q6h(B) : AFKNDDQKSAYALGASLGRY-eNSLKEQEKLGIKLDKDQLIAGVQDAFADKSKLSDQEIEQTLQAFEARVKSSAQAK-eKDAADNEAKGKEYREKFAKEKGVKTSSTGLVYQVVEAGKGE 
           _______________________________________________________________79_______________________________________________________ 

           _____________________________________________________________________________________________                            
 1q6u(A) : APKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRLDGVIPGWTEGLKNIKKGGKIKLVIPPELAYGKAGVPGIPPNSTLVFDVELLDVKPAP                            
         :                                                                                                                          
 1q6h(B) : APKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRLDGVIPGWTEGLKNIKKGGKIKLVIPPELAYGKAGVPGIPPNSTLVFDVELLDVK***                            
           _____________________________________________________________________________________________                            

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
49.4
Translation
(A)
1.0
Closure
(%)
48.8
Bending Residues
( green )
  79 - 96
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

Download and extract PyMOL PML script file Download