4-Hydroxythreonine-4-Phosphate Dehydrogenase 1

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name 4-Hydroxythreonine-4-Phosphate Dehydrogenase 1
  Conformer 1
(PDB) 		1yxo (B)
  Conformer 2
(PDB) 		1yxo (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 191 0.36   1004 - 1149   1280 - 1326
2 127 0.71   1152 - 1279

Sequence


           ________________________________________________________________________________________________________________________ 
 1yxo(B) : SLRFALTPGEPAGIGPDLCLLLARSAQPHPLIAIASRTLLQERAGQLGLAIDLKDVSPAAWPERPAKAGQLYVWDTPLAAPVRPGQLDRANAAYVLETLTRAGQGCLDGHFAGiTAPVHK 
         :                                                                                                                          
 1yxo(A) : SLRFALTPGEPAGIGPDLCLLLARSAQPHPLIAIASRTLLQERAGQLGLAIDLKDVSPAAWPERPAKAGQLYVWDTPLAAPVRPGQLDRANAAYVLETLTRAGQGCLDGHFAGiTAPVHK 
           ________________________________________________________________________________________________________________________ 

           ______________________1148______________________________________________________________________________________________ 
 1yxo(B) : GVINEAGIPFSGHTEFLADLTHTAQVVlATRGLRVALATTHLPLREVADAISDERLTRVARILHADLRDKFGIAHPRILVCGLNPHAGEGGHLGREEIEVIEPCLERLRGEGLDLIGPLP 
         :                                                                                                                          
 1yxo(A) : GVINEAGIPFSGHTEFLADLTHTAQVVlATRGLRVALATTHLPLREVADAISDERLTRVARILHADLRDKFGIAHPRILVCGLNPHAGEGGHLGREEIEVIEPCLERLRGEGLDLIGPLP 
           ______________________1148______________________________________________________________________________________________ 

           _________________________1274_____________________________________________________                                       
 1yxo(B) : ADTLFTPKHLEHCDAVLAyHDQGLPVLKYKGFGAAVNVTLGLPIIRTSVDHGTALDLAGSGRIDSGSLQVALETAYQaASRC                                       
         :                                                                                                                          
 1yxo(A) : ADTLFTPKHLEHCDAVLAyHDQGLPVLKYKGFGAAVNVTLGLPIIRTSVDHGTALDLAGSGRIDSGSLQVALETAYQaASRC                                       
           _________________________1274_____________________________________________________                                       

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		11.9
Translation
(A) 		0.3
Closure
(%) 		38.8
Bending Residues
( green ) 		  1148 - 1152
  1274 - 1281
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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