336Aa Long Hypothetical Dtdp-Glucose 4,6- Dehydratase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name 336Aa Long Hypothetical Dtdp-Glucose 4,6- Dehydratase
  Conformer 1
(PDB)
2hun (A)
  Conformer 2
(PDB)
2hun (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 275 0.43   5 - 203   216 - 249   280 - 321
2 39 1.58   204 - 215   250 - 279

Sequence


           ________________________________________________________________________________________________________________________ 
 2hun(A) : **SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEV 
         :                                                                                                                          
 2hun(B) : MHSMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEV 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________________________________203_________215_________________________ 
 2hun(A) : RFVHVSTDEVYGDILKGSFTENDRLMPSSPYSATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGT---vRDWLYVEDHVRAIELVLLKGESREIY 
         :                                                                                                                          
 2hun(B) : RFVHVSTDEVYGDILKGSFTENDRLMPSSPYSATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKGESREIY 
           ________________________________________________________________________________203_________215_________________________ 

           243_______________________________277_________________________________________________________                           
 2hun(A) : NISAGEEKTNLEVVKIILRLMGKGEELIELVEDRPGHDLRYSLDSWKITRDLKWRPKYTFDEGIKKTIDWYLKNEWWWKPLVDERILHPTPWKL                           
         :                                                                                                                          
 2hun(B) : NISAGEEKTNLEVVKIILRLMGKGEELIELVEDRPGHDLRYSLDSWKITRDLKWRPKYTFDEGIKKTIDWYLKNEWWWKPLVDER*********                           
           243_______________________________277_________________________________________________________                           

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
16.4
Translation
(A)
0.3
Closure
(%)
96.2
Bending Residues
( green )
  203 - 204
  215 - 216
  243 - 250
  277 - 281
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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