Annexin III

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Annexin III
  Conformer 1
(PDB)
1axn  
  Conformer 2
(PDB)
1aii  
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 215 0.33   5 - 119   124 - 128   136 - 142   146 - 152   156 - 159   246 - 322
2 103 0.35   120 - 123   129 - 135   143 - 145   153 - 155   160 - 245

Sequence


           ___________________________________________________________________________________________________________________119_1 
 1axn    : SASIWVGHRGTVRDYPDFSPSVDAEAIQKAIRGIGTDEKMLISILTERSNAQRQLIVKEYQAAYGKELKDDLKGDLSGHFEHLMVALVTPPAVFDAKQLKKSMKGAGTNEDALIEILTTR 
         :                                                                                                                          
 1aii    : *ASIWVGHRGTVRDYPDFSPSVDAEAIQKAIRGIGTDEKMLISILTERSNAQRQLIVKEYQAAYGKELKDDLKGDLSGHFEHLMVALVTPPAVFDAKQLKKSMKGAGTNEDALIEILTTR 
           ___________________________________________________________________________________________________________________119_1 

           23__128_132_______142_______152____159__________________________________________________________________________________ 
 1axn    : TSRQMKDISQAYYTVYKKSLGDDISSETSGDFRKALLTLADGRRDESLKVDEHLAKQDAQILYKAGENRWGTDEDKFTEILCLRSFPQLKLTFDEYRNISQKDIVDSIKGELSGHFEDLL 
         :                                                                                                                          
 1aii    : TSRQMKDISQAYYTVYKKSLGDDISSETSGDFRKALLTLADGRRDESLKVDEHLAKQDAQILYKAGENRWGTDEDKFTEILCLRSFPQLKLTFDEYRNISQKDIVDSIKGELSGHFEDLL 
           23__128_132_______142_______152____159__________________________________________________________________________________ 

           _245_______________________________________________________________________________                                      
 1axn    : LAIVNCVRNTPAFLAERLHRALKGIGTDEFTLNRIMVSRSEIDLLDIRTEFKKHYGYSLYSAIKSDTSGDYEITLLKICGGDD                                      
         :                                                                                                                          
 1aii    : LAIVNCVRNTPAFLAERLHRALKGIGTDEFTLNRIMVSRSEIDLLDIRTEFKKHYGYSLYSAIKSDTSGDYEITLLKICGGDD                                      
           _245_______________________________________________________________________________                                      

Morph

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Status: Initialising

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
4.1
Translation
(A)
-0.2
Closure
(%)
34.1
Bending Residues
( green )
  119 - 120
  123 - 124
  128 - 129
  132 - 140
  142 - 143
  145 - 146
  152 - 153
  155 - 156
  159 - 160
  245 - 246
Bending Region Analysis

Dynamic Contact Graph

The dynamic contact graph is still being generated. Progress: Initialising

PyMOL Script

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