Anthranilate Phosphoribosyltransferase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Anthranilate Phosphoribosyltransferase
  Conformer 1
(PDB)
1o17 (A)
  Conformer 2
(PDB)
1o17 (D)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 239 0.67   67 - 153   177 - 199   204 - 236   242 - 341
2 96 0.38   3 - 66   154 - 176   200 - 203   237 - 241

Sequence


           ______________________________________________________________64________________________________________________________ 
 1o17(A) : MNINEILKKLINKSDLEINEAEELAKAIIRGEVPEILVSAILVALRMKGESKNEIVGFARAMRELAIKIDVPNAIDTAG----gLGTVNVSTASAILLSLVNPVAKHGNRAVSGKSGSAD 
         :                                                                                                                          
 1o17(D) : MNINEILKKLINKSDLEINEAEELAKAIIRGEVPEILVSAILVALRMKGESKNEIVGFARAMRELAIKIDVPNAIDTAGTGGDGLGTVNVSTASAILLSLVNPVAKHGNRAVSGKSGSAD 
           ______________________________________________________________64________________________________________________________ 

           ___________________________150_______________________176____________________199_203______________________________236__24 
 1o17(A) : VLEALGYNIIVPPERAKELVNKTNFVFLFAQYYHPAMKNVANVRKTLGIRTIFNILGPLTNPANAKYQLMGVFSKDHLDLLSKSAYELDFNKIILVYGEPGIDEVSPIGNTFMKIVSKRG 
         :                                                                                                                          
 1o17(D) : VLEALGYNIIVPPERAKELVNKTNFVFLFAQYYHPAMKNVANVRKTLGIRTIFNILGPLTNPANAKYQLMGVFSKDHLDLLSKSAYELDFNKIILVYGEPGIDEVSPIGNTFMKIVSKRG 
           ___________________________150_______________________176____________________199_203______________________________236__24 

           1________________________________________________________________________________________________________                
 1o17(A) : IEEVKLNVTDFGISPIPIEKLIVNSAEDSAIKIVRAFLGKDEHVAEFIKINTAVALFALDRVGDFREGYEYADHLIEKSLDKLNEIISMNGDVTKLKTIVVKS**                
         :                                                                                                                          
 1o17(D) : IEEVKLNVTDFGISPIPIEKLIVNSAEDSAIKIVRAFLGKDEHVAEFIKINTAVALFALDRVGDFREGYEYADHLIEKSLDKLNEIISMNGDVTKLKTIVVKSSG                
           1________________________________________________________________________________________________________                

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
8.2
Translation
(A)
0.2
Closure
(%)
99.5
Bending Residues
( green )
  64 - 67
  150 - 155
  176 - 177
  199 - 201
  203 - 204
  236 - 239
  241 - 242
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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