Anthranilate Phosphoribosyltransferase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Anthranilate Phosphoribosyltransferase
  Conformer 1
(PDB)
1khd (D)
  Conformer 2
(PDB)
1kgz (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 217 0.73   77 - 82   87 - 115   123 - 123   130 - 161   163 - 168   191 - 192   200 - 342
2 105 0.6   14 - 76   83 - 86   116 - 122   124 - 124   162 - 162   169 - 190   193 - 199

Sequence


           _______________________________________________________________76____82__86__________________________115__120___________ 
 1khd(D) : THQPILEKLFKSQSMTQEESHQLFAAIVRGELEDSQLAAALISMKMRGERPEEIAGAASALLADAQPFPRPDYDFADIVGTGGDG--sINISTASAFVAASCGAKVAKHGNRSqPLAGSC 
         :                                                                                                                          
 1kgz(A) : THQPILEKLFKSQSMTQEESHQLFAAIVRGELEDSQLAAALISMKMRGERPEEIAGAASALLADAQPFPRPDYDFADIVGTGGDGTNSINISTASAFVAASCGAKVAKHGNRS---aGSC 
           _______________________________________________________________76____82__86__________________________115__120___________ 

           _________________________161____168___________________190______199______________________________________________________ 
 1khd(D) : DLLQAFGIRLDMSAEDSRQALDDLNVCFLFAPQYHTGFRHAMPVRQQLKTRTIFNVLGPLINPARPPKALIGVYSPELVLPIAQALKVLGYKNAAVVHGGGMDEVAIHTPTQVAELNNGE 
         :                                                                                                                          
 1kgz(A) : DLLQAFGIRLDMSAEDSRQALDDLNVCFLFAPQYHTGFRHAMPVRQQLKTRTIFNVLGPLINPARPPKALIGVYSPELVLPIAQALKVLGYKNAAVVHGGGMDEVAIHTPTQVAELNNGE 
           _________________________161____168___________________190______199______________________________________________________ 

           ___________________________________________________________________________________________                              
 1khd(D) : IESYQLSPQDFGLQSYSLNALQGGTPEENRDILARLLQGKGDAAHARQVAANVALLLKLFGQDNLRHNAQLALETIRSGTAFERVTALAAR                              
         :                                                                                                                          
 1kgz(A) : IESYQLSPQDFGLQSYSLNALQGGTPEENRDILARLLQGKGDAAHARQVAANVALLLKLFGQDNLRHNAQLALETIRSGTAFERVTALAAR                              
           ___________________________________________________________________________________________                              

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
6.6
Translation
(A)
0.1
Closure
(%)
63.2
Bending Residues
( green )
  76 - 77
  82 - 83
  86 - 87
  115 - 116
  120 - 135
  161 - 163
  168 - 172
  190 - 193
  199 - 200
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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