Arginine Kinase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Arginine Kinase
  Conformer 1
(PDB) 		6ky2 (A)
  Conformer 2
(PDB) 		1bg0 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 242 1.26   4 - 91   96 - 96   98 - 99   126 - 234   240 - 281
2 108 3.76   92 - 95   97 - 97   100 - 125   235 - 239   282 - 355

Sequence


           ____________________________________________________________________________________________90___95_____________________ 
 6ky2(A) : HHHHMVDAAVAEKLEAGFQKLQEATNCKSLLKKHLTREIFDKIKDLKTSFGSTLLDVIQSGVENLDSGFGVYAPDAEAYSVFNDLFEPMICDYHTGFKPGDAHPPRDFGDLETFGNLDPE 
         :                                                                                                                          
 1bg0(A) : *****VDQATLDKLEAGFKKLQEASDCKSLLKKHLTKDVFDSIKNKKTGMGATLLDVIQSGVENLDSGVGIYAPDAESYRTFGPLFDPIIDDYHGGFKLTDKHPPKQWGDINTLVGLDPA 
           ____________________________________________________________________________________________90___95_____________________ 

           ______125________________________________________________________________________________________________________232____ 
 6ky2(A) : GAFIVSTRVRCGRSLAGYAFNPCLTEANYKEMEEKVVASLSSLEGELKGTYYPLTGMTKEVQTQLIQDRFLFKEGDRFLQAANACRYWPTGRGIYHNDAKTFLVWCNEEDHLRIISMQKG 
         :                                                                                                                          
 1bg0(A) : GQFIISTRVRCGRSLQGYPFNPCLTAEQYKEMEEKVSSTLSSMEDELKGTYYPLTGMSKATQQQLIDDHFLFKEGDRFLQTANACRYWPTGRGIFHNDAKTFLVWVNEEDHLRIISMQKG 
           ______125________________________________________________________________________________________________________232____ 

           239_______________________________________281___________________________________________________________________________ 
 6ky2(A) : GDLKAVYARLVNAINEIEKRIPFSHHDKYGFLTFCPTNLGTTIRASVHIALPKLAADLAKLa--AGKFNLQVRGTAGEHTEAEGGVYDISNKRRMGLTEYQAVKEMYDGLQELIRMEKEA 
         :                                                                                                                          
 1bg0(A) : GDLKTVYKRLVTAVDNIESKLPFSHDDRFGFLTFCPTNLGTTMRASVHIQLPKLAKDRKVLEDIASKFNLQVRGTRGEHTESEGGVYDISNKRRLGLTEYQAVREMQDGILEMIKMEKAA 
           239_______________________________________281___________________________________________________________________________ 

           _                                                                                                                        
 6ky2(A) : A                                                                                                                        
         :                                                                                                                          
 1bg0(A) : A                                                                                                                        
           _                                                                                                                        

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		24.8
Translation
(A) 		-0.7
Closure
(%) 		96.9
Bending Residues
( green ) 		  90 - 92
  95 - 100
  125 - 126
  232 - 235
  239 - 242
  281 - 282
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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