Arylalkylamine N-Acetyltransferase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Arylalkylamine N-Acetyltransferase
  Conformer 1
(PDB)
1b6b (B)
  Conformer 2
(PDB)
1cjw (A)
  Window Length 11
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 87 0.59   74 - 81   97 - 122   138 - 190
2 38 0.95   40 - 47   82 - 96   123 - 137

Sequence


           ____________43____________________________________81_____________96_______________________122____________137____________ 
 1b6b(B) : *****NEFRCLTPEDAAGVFEIEREAF-----------dEVQHFLTLCPELSLGWFVEGRLVAFIIGSLWDEERLTQESLALHRPRGHSAHLHALAVHRSFRQQGKGSVLLWRYLHHVGA 
         :                                                                                                                          
 1cjw(A) : HTLPANEFRCLTPEDAAGVFEIEREAFISVSGNCPLNLDEVQHFLTLCPELSLGWFVEGRLVAFIIGSLWDEERLTQESLALHRPRGHSAHLHALAVHRSFRQQGKGSVLLWRYLHHVGA 
           ____________43____________________________________81_____________96_______________________122____________137____________ 

           ____________________________________________________                                                                     
 1b6b(B) : QPAVRRAVLMCEDALVPFYQRFGFHPAGPCAIVVGSLTFTEMHCSLRGHAAL                                                                     
         :                                                                                                                          
 1cjw(A) : QPAVRRAVLMCEDALVPFYQRFGFHPAGPCAIVVGSLTFTEMHCSL******                                                                     
           ____________________________________________________                                                                     

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
9.8
Translation
(A)
-0.1
Closure
(%)
48.4
Bending Residues
( green )
  43 - 76
  81 - 82
  96 - 97
  122 - 123
  137 - 139
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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