Aspartate Carbamoyltransferase Regulatory Chain

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Aspartate Carbamoyltransferase Regulatory Chain
  Conformer 1
(PDB)
1d09 (B)
  Conformer 2
(PDB)
1za1 (B)
  Window Length 7
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 98 1.01   13 - 101   127 - 135
2 40 0.46   102 - 126   136 - 150

Sequence


           __________________________________________________________________________________________________101___________________ 
 1d09(B) : MTHDNKLQVEAIKRGTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKIENTFLSEDQVDQLALYAPQATVNRIDNYEVVGKSRPSLPERIDNVLVCPNSNCISHAEP 
         :                                                                                                                          
 1za1(B) : *THDNKLQVEAIKRGTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKIENTFLSEDQVDQLALYAPQATVNRIDNYEVVGKSRPSLPERIDNVLVCPNSNCISHAEP 
           __________________________________________________________________________________________________101___________________ 

           ___126_____134___________________                                                                                        
 1d09(B) : VSSSFAVRKRANDIALKCKYCEKEFSHNVVLAN                                                                                        
         :                                                                                                                          
 1za1(B) : VSSSFAVRKRANDIALKCKYCEKEFSHNVVLAN                                                                                        
           ___126_____134___________________                                                                                        

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
10.8
Translation
(A)
0.8
Closure
(%)
54.4
Bending Residues
( green )
  101 - 102
  126 - 127
  134 - 136
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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