Cyclohexadienyl Dehydratase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Cyclohexadienyl Dehydratase
  Conformer 1
(PDB) 		3kbr (A)
  Conformer 2
(PDB) 		5hpq (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 124 0.57   29 - 124   221 - 251
2 93 1.31   125 - 220

Sequence


           _______________________________________________________________________________________________124______________________ 
 3kbr(A) : ESRLDRILESGVLRVATTGDYKPFSYRTEEGGYAGFDVD-aQRLAESLGAKLVVVPTSWPNL-rDFADDRFDIA-sGISINLERQRQAYFSIPYLRDGKTPITLCSEEARFQTLEQIDQP 
         :                                                                                                                          
 5hpq(A) : ESRLDRILESGVLRVATTGDYKPFSYRTEEGGYAGFDVDMAQRLAESLGAKLVVVPTSWPNLMRDFADDRFDIAMSGISINLERQRQAYFSIPYLRDGKTPITLCSEEARFQTLEQIDQP 
           _______________________________________________________________________________________________110______________________ 

           _______________________________________________________________212____________________________________________________   
 3kbr(A) : GVTAIVNPGGTNEKFARANLKKARILVHPDNVTIFQQIVDGKADL--tDAIEARLQSRLHPELCAVHPQ-pFDFAEKAYLLPRDEAFKRYVDQWLHIAEQSGLLRQR-eHWL******   
         :                                                                                                                          
 5hpq(A) : GVTAIVNPGGTNEKFARANLKKARILVHPDNVTIFQQIVDGKADLMMTDAIEARLQSRLHPELCAVHPQQPFDFAEKAYLLPRDEAFKRYVDQWLHIAEQSGLLRQRMEHWLEYRWPT   
           _______________________________________________________________198____________________________________________________   

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		11.0
Translation
(A) 		-1.0
Closure
(%) 		99.4
Bending Residues
( green ) 		  124 - 125
  212 - 221
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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