Dbh Protein

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Dbh Protein
  Conformer 1
(PDB)
1k1q (A)
  Conformer 2
(PDB)
2rdi (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 229 2.46   3 - 243
2 97 1.12   244 - 341

Sequence


           ________________________________________________________________________________________________________________________ 
 1k1q(A) : MIVIFVDFDYFFAQVEEVLNPQYKGKPLVVSVYS-----aNYEARKLGVKAGMPIIKAMQIAPSAIYVPMRKPIYEAFSNRIMNLLNKHADKIEVASIDEAYLDVTNKVEGNFENGIELA 
         :                                                                                                                          
 2rdi(A) : MIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFsGAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEVYQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVR-DYREAYNLG 
           ________________________________________________________________________________________________________________________ 

           _____________________________________________________________________________________________________________238________ 
 1k1q(A) : RKIKQEILEKEKITVTVGVAPNKILAKIIADKSKPNGLGVIRPTEVQDFLNELDIDEIPGIGSVLARRLNELGIQKLRDILSKNYNELEKITGKAKALYLLKLAQNKYSEPVENKSKIPH 
         :                                                                                                                          
 2rdi(A) : LEIKNKILEKEKITVTVGISKNKVFAKIAADMAKPNGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGINKLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTRVRKSI 
           _____________________________________________________________________________________________________________237________ 

           ___________________________________________________________________________________________________                      
 1k1q(A) : GRYLTLPYNTRDVKVILPYLKKAINEAYNKVNG-IPMRITVIAIMEDLDILSKGKKFKHGISIDNAYKVAEDLLRELLVRDKRRNVRRIGVKLDNIIIN                      
         :                                                                                                                          
 2rdi(A) : GRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRIPKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQKILEEDERK-IRRIGVRFSKFIT*                      
           ___________________________________________________________________________________________________                      

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
176.9
Translation
(A)
8.0
Closure
(%)
53.1
Bending Residues
( green )
  238 - 245
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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