Acetylglutamate Kinase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Acetylglutamate Kinase
  Conformer 1
(PDB)
2wxb (A)
  Conformer 2
(PDB)
2wxb (B)
  Window Length 7
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 225 1.07   5 - 179   187 - 194   210 - 251
2 26 1.2   180 - 186   195 - 209   252 - 255

Sequence


           ________________________________________________________________________________________________________________________ 
 2wxb(A) : *MNPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGDSVKVTQLDEELG 
         :                                                                                                                          
 2wxb(B) : MMNPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGGGCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGLFLGDGDSVKVTQLDEELG 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________179_183_______________________209_______________________________ 
 2wxb(A) : HVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGADLILLSDVSGILDGKGQRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIASWRHA 
         :                                                                                                                          
 2wxb(B) : HVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVNADQAATALAATLGADLILLSDVSGILDGKGQRIAEMTAAKAEQLIEQGIITDGMIVKVNAALDAARTLGRPVDIASWRHA 
           ________________________________________________________179_183_______________________209_______________________________ 

           __245_____________                                                                                                       
 2wxb(A) : EQLPALFNGMPMGTRILA                                                                                                       
         :                                                                                                                          
 2wxb(B) : EQLPALFNGMPMGTRILA                                                                                                       
           __245_____________                                                                                                       

Morph

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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
12.7
Translation
(A)
-0.8
Closure
(%)
40.2
Bending Residues
( green )
  179 - 180
  183 - 195
  209 - 212
  245 - 252
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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