Actin-Like Protein 3

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Actin-Like Protein 3
  Conformer 1
(PDB)
2p9l (A)
  Conformer 2
(PDB)
2p9i (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 227 0.54   113 - 118   148 - 373
2 161 0.5   5 - 112   119 - 147   374 - 410

Sequence


           _________________________________________________________________________________________________112___118______________ 
 2p9l(A) : AGRLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKEvMKGVDDLDFFIGDEAIEKPTYATKWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFE 
         :                                                                                                                          
 2p9i(A) : *GRLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKE--kGVDDLDFFIGDEAIEKPTYATKWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFE 
           _________________________________________________________________________________________________112___118______________ 

           ____________147_________________________________________________________________________________________________________ 
 2p9l(A) : SFNVPGLYIAVQAVLALAASWTS-qVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVKEFNKYDTDGSKW 
         :                                                                                                                          
 2p9i(A) : SFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVKEFNKYDTDGSKW 
           ____________147_________________________________________________________________________________________________________ 

           __________________________________________________________________________________________________________________373___ 
 2p9l(A) : IKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSkPKPIDVQVITHHMQRYA 
         :                                                                                                                          
 2p9i(A) : IKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSkPKPIDVQVITHHMQRYA 
           __________________________________________________________________________________________________________________373___ 

           ________________________________________                                                                                 
 2p9l(A) : VWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNPVFGV                                                                                 
         :                                                                                                                          
 2p9i(A) : VWFGGSMLASTPEFYQVCHTKKDYEEIGPSICRHNP****                                                                                 
           ________________________________________                                                                                 

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
5.7
Translation
(A)
0.2
Closure
(%)
89.8
Bending Residues
( green )
  112 - 113
  118 - 119
  147 - 148
  373 - 374
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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