Allophanate Hydrolase Subunit 1

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Allophanate Hydrolase Subunit 1
  Conformer 1
(PDB)
3mml (D)
  Conformer 2
(PDB)
3mml (F)
  Window Length 7
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 118 0.21   86 - 206
2 67 0.27   4 - 70

Sequence


           ___________________________________________________________________69___________________________________________________ 
 3mml(D) : STLGTVHNYGDQALLLEFDSTAEVLAWTETLREAELLGVVDIVPAARTVLVKLAGPRYQAPTRQRLGKLRVRPEAITHQPPGDRVDVTIDVVYDGADLHEVASLTGtPAQVIAAHTGTPW 
         :                                                                                                                          
 3mml(F) : STLGTVHNYGDQALLLEFDSTAEVLAWTETLREAELLGVVDIVPAARTVLVKLAGPRYQAPTRQRLGKLRVRPEAITHQPPGDRVDVTIDVVYDGADLHEVASLTGtPAQVIAAHTGTPW 
           ___________________________________________________________________69___________________________________________________ 

           _______________________________________________________________________________________                                  
 3mml(D) : RVGFCGFAPGFAYLVDGDARLQVPRRAEPRTSVPAGAVALAGEFSGVYPRQSPGGWQLIGHTDAVfDVNRDKPALLTPGwVQFRAV*                                  
         :                                                                                                                          
 3mml(F) : RVGFCGFAPGFAYLVDGDARLQVPRRAEPRTSVPAGAVALAGEFSGVYPRQSPGGWQLIGHTDAVfDVNRDKPALLTPGwVQFRAVG                                  
           _______________________________________________________________________________________                                  

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
19.1
Translation
(A)
-0.2
Closure
(%)
79.5
Bending Residues
( green )
  69 - 88
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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