Aspartate Beta-Semialdehyde Dehydrogenase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Aspartate Beta-Semialdehyde Dehydrogenase
  Conformer 1
(PDB)
2gyy (A)
  Conformer 2
(PDB)
2gz1 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 222 0.27   106 - 116   125 - 335
2 126 0.47   4 - 105   117 - 124   336 - 355

Sequence


           _____________________________________________________________________________________________________105___111__________ 
 2gyy(A) : GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLAS----gKSLKFKDQDITIEETTETAFEGVDIALFSAGSSTSAKYAPYAVKAGVVVVDNTSYFRQNPDVPLVVPEVNAHALDAHNG 
         :                                                                                                                          
 2gz1(A) : GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFKDQDITIEETTETAFEGVDIALFSAGSSTSAKYAPYAVKAGVVVVDNTSYFRQNPDVPLVVPEVNAHALDAHNG 
           _____________________________________________________________________________________________________105___111__________ 

           124_____________________________________________________________________________________________________________________ 
 2gyy(A) : IIACPNCSTIQMMVALEPVRQKWGLDRIIVSTYQAVSGAGMGAILETQRELREVLNDGVKPCDLHAEILPSGGDKKHYPIAFNALPQIDVFTDNDYTYEEMKMTKETKKIMEDDSIAVSA 
         :                                                                                                                          
 2gz1(A) : IIACPNCSTIQMMVALEPVRQKWGLDRIIVSTYQAVSGAGMGAILETQRELREVLNDGVKPCDLHAEILPSGGDKKHYPIAFNALPQIDVFTDNDYTYEEMKMTKETKKIMEDDSIAVSA 
           124_____________________________________________________________________________________________________________________ 

           ________________________________________________________________________________________332__________________________    
 2gyy(A) : TCVRIPVLSAHSESVYIETKEVAPIEEVKAAIAAFPGAVLEDDVAHQIYPQAINAVGSRDTFVGRIRKDLDAEKGIHMWVVSDNLLKGAAWNSVQIAETLHERGLVRPTAELKFEL*    
         :                                                                                                                          
 2gz1(A) : TCVRIPVLSAHSESVYIETKEVAPIEEVKAAIAAFPGAVLEDDVAHQIYPQAINAVGSRDTFVGRIRKDLDAEKGIHMWVVSDNLLKGAAWNSVQIAETLHERGLVRPTAELKFELK    
           ________________________________________________________________________________________332__________________________    

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
6.9
Translation
(A)
0.1
Closure
(%)
99.9
Bending Residues
( green )
  105 - 107
  111 - 117
  124 - 126
  332 - 336
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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