Beta-Arrestin1

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Beta-Arrestin1
  Conformer 1
(PDB)
4jqi (A)
  Conformer 2
(PDB)
3p2d (A)
  Window Length 13
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 313 3.48   12 - 64   75 - 128   139 - 355
2 20 7.01   65 - 74   129 - 138

Sequence


           ______________________________________________________60____________74_________________________________________________1 
 4jqi(A) : *TRVFKKASPNGKLTVYLGKRDFVDHIDLVDPVDGVVLVDPEYLKERRVYVTLTCAFRYGREDLDVLGLTFRKDLFVANVQSFPPAPEDKKPLTRLQERLIKKLGEHAYPFTFEIPPNLP 
         :                                                                                                                          
 3p2d(A) : GTRVFKKSSPNCKLTVYLGKRDFVDHLDKVDPVDGVVLVDPDYLKDRKVFVTLTCAFRYGREDLDVLGLSFRKDLFIANYQAFPPTPNPPRPPTRLQERLLRKLGQHAHPFFFTIPQNLP 
           ______________________________________________________61____________75_________________________________________________1 

           26_________138__________________________________________________________________________________________________________ 
 4jqi(A) : CSVTLQPGPEDTGKACGVDYEVKAFCAENLEEKIHKRNSVRLVIRKVQYAPERPGPQPTAETTRQFLMSDKPLHLEASLDKEIYYHGEPISVNVHVTNNTNKTVKKIKISVRQYADICLF 
         :                                                                                                                          
 3p2d(A) : CSVTLQPGPEDTGKACGVDFEIRAFCAKSLEEKSHKRNSVRLVIRKVQFAPEKPGPQPSAETTRHFLMSDRSLHLEASLDKELYYHGEPLNVNVHVTNNSTKTVKKIKVSVRQYADICLF 
           27_________139__________________________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 4jqi(A) : NTAQYKCPVAMEEADDTVAPSSTFCKVYTLTPFLANNREKRGLALDGKLKHEDTNLASSTLLRE---rEILGIIVSYKVKVKLVVSRGGLLGDLASSDVAVELPFTLMHPKPKEEPP*** 
         :                                                                                                                          
 3p2d(A) : STAQYKCPVAQVEQDDQVSPSSTFCKVYTITPLLSNNREKRGLALDGKLKHEDTNLASSTIVKEGANKEVLGILVSYRVKVKLVVSRGG--------DVSVELPFVLMHPKPHdIVFEDF 
           ________________________________________________________________________________________________________________________ 

           __                                                                                                                       
 4jqi(A) : **                                                                                                                       
         :                                                                                                                          
 3p2d(A) : AR                                                                                                                       
           __                                                                                                                       

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
139.6
Translation
(A)
-0.4
Closure
(%)
68.8
Bending Residues
( green )
  60 - 65
  74 - 75
  126 - 129
  138 - 143
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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