Bifunctional P-450/nadph-P450 Reductase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Bifunctional P-450/nadph-P450 Reductase
  Conformer 1
(PDB)
4kf2 (A)
  Conformer 2
(PDB)
3ekf (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 406 0.87   5 - 175   216 - 455
2 38 0.51   176 - 215

Sequence


           ________________________________________________________________________________________________________________________ 
 4kf2(A) : *KEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNLSQALKFVRDFFGDGLVTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVD 
         :                                                                                                                          
 3ekf(B) : IKEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDESRFDKNLSQALKFVRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYHAMMVD 
           ________________________________________________________________________________________________________________________ 

           _________________________________________________173______________________________________214___________________________ 
 4kf2(A) : IAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITSMVRALDEAMNKLQRA--dDPAYDENKRQFQEDIKVMNDLVDKIIADRKASqSDDLLTHMLNGKDP 
         :                                                                                                                          
 3ekf(B) : IAVQLVQKWERLNADEHIEVPEDMTRLTLDTIGLCGFNYRFNSFYRDQPHPFITsMVRALDEAMNKLQrANPDDPAYDENKRQFQEDIKVMNDLVDKIIaDRKASqSDDLLTHMLNGKDP 
           _________________________________________________173______________________________________214___________________________ 

           ________________________________________________________________________________________________________________________ 
 4kf2(A) : ETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRD 
         :                                                                                                                          
 3ekf(B) : e---PLDDENIRyQIITFLIQGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRD 
           ________________________________________________________________________________________________________________________ 

           _______________________________________________________________________________________________                          
 4kf2(A) : KTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELDIKETLTLKPEGFVVKAKSKKIPLGG*                          
         :                                                                                                                          
 3ekf(B) : KTIWGDDVEEFRPERFENPSAIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNyELDIKETLTLKPEGFVVKAKSKKIPLGGI                          
           _______________________________________________________________________________________________                          

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
20.8
Translation
(A)
0.9
Closure
(%)
99.7
Bending Residues
( green )
  173 - 176
  214 - 216
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

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