Bira Bifunctional Protein

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Bira Bifunctional Protein
  Conformer 1
(PDB) 		1bib (A)
  Conformer 2
(PDB) 		2ewn (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 221 1.55   66 - 226   234 - 315
2 69 1.46   4 - 65   227 - 233

Sequence


           ______________________________________________________________65________________________________________________________ 
 1bib(A) : KDNTVPLKLIALLANGEFHSGEQLGETLGMSRAAINKHIQTLRDWGVDVFTVPGKGYSLPEPIQLLNAKQILGQLDGGSVAVLPVIDSTNQYLLDRIGELKSGDACIAEYQQAGRGR--- 
         :                                                                                                                          
 2ewn(B) : KDNTVPLKLIALLANGEFHSGEQLGETLGMSRAAINKHIQTLRDWGVDVFTVPGKGYSLPEPIQLLNAKQILGQLDGGSVAVLPVIDSTNQYLLDRIGELKSGDACIAEYQQAGRGRRGR 
           ______________________________________________________________65________________________________________________________ 

           ______________________________________________________________________________________________________226____233________ 
 1bib(A) : ---sPFGANLYLSMFWRLEQ-pAAAIGLSLVIGIVMAEVLRKLGADKVRVKWPNDLYLQDRKLAGILVELTG----aAQIVIGAGINMAM-----------wITLQEAGINLDRNTLAAM 
         :                                                                                                                          
 2ewn(B) : KWFSPFGANLYLSMFWRLEQGPAAAIGLSLVIGIVMAEVLRKLGADKVRVKWPNDLYLQDRKLAGILVELTGKTGDAAQIVIGAGINMAMRRVEESVVNQGWITLQEAGINLDRNTLAAM 
           ______________________________________________________________________________________________________226____233________ 

           _____________________________________________________________________________                                            
 1bib(A) : LIRELRAALELFEQEGLAPYLSRWEKLDNFINRPVKLIIGDKEIFGISRGIDKQGALLLEQDGIIKPWMGGEISLR*                                            
         :                                                                                                                          
 2ewn(B) : LIRELRAALELFEQEGLAPYLSRWEKLDNFINRPVKLIIGDKEIFGISRGIDKQGALLLEQDGIIKPWMGGEISLRS                                            
           _____________________________________________________________________________                                            

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		21.4
Translation
(A) 		-0.4
Closure
(%) 		8.6
Bending Residues
( green ) 		  65 - 66
  226 - 227
  233 - 234
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Mixed

PyMOL Script

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