Caffeic Acid 3-O-Methyltransferase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Caffeic Acid 3-O-Methyltransferase
  Conformer 1
(PDB)
1kyw (C)
  Conformer 2
(PDB)
1kyw (F)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 202 0.53   21 - 188   299 - 329   354 - 356
2 139 0.9   189 - 298   330 - 353   357 - 361

Sequence


           ________________________________________________________________________________________________________________________ 
 1kyw(C) : GETQITPTHISDEEANLFAMQLASASVLPMILKSALELDLLEIIAKAGPGAQISPIEIASQLPTTNPDAPVMLDRMLRLLACYIILTCSVRTQQDGKVQRLYGLATVAKYLVKNEDGVSI 
         :                                                                                                                          
 1kyw(F) : GETQITPTHISDEEANLFAMQLASASVLPMILKSALELDLLEIIAKAGPGAQISPIEIASQLPTTNPDAPVMLDRMLRLLACYIILTCSVRTQQDGKVQRLYGLATVAKYLVKNEDGVSI 
           ________________________________________________________________________________________________________________________ 

           _____________________________________________________________188________________________________________________________ 
 1kyw(C) : SALNLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYTGFEGLKSLVDVGGGTGAVINTIVSKYPTIKGINFDLPHVIEDAPSYPG 
         :                                                                                                                          
 1kyw(F) : SALNLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYTGFEGLKSLVDVGGGTGAVINTIVSKYPTIKGINFDLPHVIEDAPSYPG 
           _____________________________________________________________188________________________________________________________ 

           ___________________________________________________298______________________323___________________________353___________ 
 1kyw(C) : VEHVGGDMFVSIPKADAVFMKWICHDWSDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTQKEFEDLAKGAGFQGFKVHCNAFNTYIMEFLKK 
         :                                                                                                                          
 1kyw(F) : VEHVGGDMFVSIPKADAVFMKWICHDWSDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTQKEFEDLAKGAGFQGFKVHCNAFNTYIMEFLKK 
           ___________________________________________________298______________________323___________________________353___________ 

           _                                                                                                                        
 1kyw(C) : V                                                                                                                        
         :                                                                                                                          
 1kyw(F) : V                                                                                                                        
           _                                                                                                                        

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
7.0
Translation
(A)
0.5
Closure
(%)
83.3
Bending Residues
( green )
  188 - 189
  298 - 299
  323 - 330
  353 - 354
  356 - 357
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

Download and extract PyMOL PML script file Download