Diaphanous Protein Homolog 1

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Diaphanous Protein Homolog 1
  Conformer 1
(PDB)
1v9d (B)
  Conformer 2
(PDB)
1v9d (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 245 1.04   832 - 989   1020 - 1130
2 48 1.38   990 - 1019   1131 - 1148

Sequence


           ________________________________________________________________________________________________________________________ 
 1v9d(B) : *KELKVLDSKTAQNLSIFLGSFRMPYQEIKNVILEVNEAVLTESMIQNLIKQMPEPEQLKMLSELKEEYDDLAESEQFGVVMGTVPRLRPRLNAILFKLQFSEQVENIKPEIVSVTAACE 
         :                                                                                                                          
 1v9d(A) : VKELKVLDSKTAQNLSIFLGSFRMPYQEIKNVILEVNEAVLTESMIQNLIKQMPEPEQLKMLSELKEEYDDLAESEQFGVVMGTVPRLRPRLNAILFKLQFSEQVENIKPEIVSVTAACE 
           ________________________________________________________________________________________________________________________ 

           951________________________________________________________________1019_________________________________________________ 
 1v9d(B) : ELRKSENFSSLLELTLLVGNYMNAGSRNAGAFGFNISFLCKLRDTKSADQKMTLLHFLAELCENDHPEVLKFPDELAHVEKASRVSAENLQKSLDQMKKQIADVERDVQNFPAATDEKDK 
         :                                                                                                                          
 1v9d(A) : ELRKSENFSSLL------------------------sFLCKLRDTKSADQKMTLLHFLAELCENDHPEVLKFPDELAHVEKASRVSAENLQKSLDQMKKQIADVERDVQNFPAATDEKDK 
           951________________________________________________________________1019_________________________________________________ 

           _________________________________________________________1129_______________________________                             
 1v9d(B) : FVEKMTSFVKDAQEQYNKLRMMHSNMETLYKELGDYFVFDPKKLSVEEFFMDLHNFRNMFLQAVKENQKRRETEEKMRRAKL**********                             
         :                                                                                                                          
 1v9d(A) : FVEKMTSFVKDAQEQYNKLRMMHSNMETLYKELGDYFVFDPKKLSVEEFFMDLHNFRNMFLQAVKENQKRRETEEKMRRAKLAKEKAEKERL                             
           _________________________________________________________1129_______________________________                             

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
21.3
Translation
(A)
-0.3
Closure
(%)
37.9
Bending Residues
( green )
  951 - 990
  1019 - 1021
  1129 - 1131
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Hinge

PyMOL Script

Download and extract PyMOL PML script file Download