Histidyl-Trna Synthetase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Histidyl-Trna Synthetase
  Conformer 1
(PDB)
1wu7 (A)
  Conformer 2
(PDB)
1wu7 (B)
  Window Length 11
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 352 1.53   10 - 182   219 - 264   275 - 419
2 45 1.58   183 - 218   265 - 274

Sequence


           ________________________________________________________________________________________________________________________ 
 1wu7(A) : RLQIEKIRGFRDFYPEDdVEKFIFKTAEEAAEAFGFRRIDFPSLEYLDLYRIKSGEELLQQTYSFVDKGGREVTLIPEATPSTVRvTSRKDLQRPLRWYSFPKVWRYEEPQAGRYREHYQ 
         :                                                                                                                          
 1wu7(B) : **QIEKIRGFRDFYPEDdVEKFIFKTAEEAAEAFGFRRIDFPSLEYLDLYRIKSGEELLQQTYSFVDKGGREVTLIPEATPSTVRvTSRKDLQRPLRWYSFPKVWRYEEPQAGRYREHYQ 
           ________________________________________________________________________________________________________________________ 

           ______________________________________________174_______________________________________218_____________________________ 
 1wu7(A) : FNADIFGSDSPEADAEVIALASSILDRLGLQDIYEIRINSRKIeEIIGGtSSDPFSVFSIIDRYHKISREEFVDQLRSAGIGEDGVSiADLCSGTRGIDEaRITGKSSEEIARaAVEDLL 
         :                                                                                                                          
 1wu7(B) : FNADIFGSDSPEADAEVIALASSILDRLGLQDIYEIRINSRKIeEIIGGtSSDPFSVFSIIDRYHKISREEFVDQLRSAGIGEDGVSiADLCSGTRGIDEaRITGKSSEEIARaAVEDLL 
           ______________________________________________174_______________________________________218_____________________________ 

           _________261__________274_______________________________________________________________________________________________ 
 1wu7(A) : ASYGVKNVRYDFSIVRGLSYYTGIVFEAYDRSGQFRAILGGGRYDNLASLsGESVPAVGFGgDAVISLLLKRENVQIPREKKSVYICRVGKINSSInEYSRKLRERGnVTVEIeRGLSAQ 
         :                                                                                                                          
 1wu7(B) : ASYGVKNVRYDFSIVRGLSYYTGIVFEAYDRSGQFRAILGGGRYDNLASLsGESVPAVGFGgDAVISLLLKRENVQIPREKKSVYICRVGKINSSInEYSRKLRERGnVTVEIeRGLSAQ 
           _________261__________274_______________________________________________________________________________________________ 

           ___________________________________________________                                                                      
 1wu7(A) : LKYASAIGADFAVIFGERDLERGVVTIRNyTGSQENVGLDSVVEHLISQAT                                                                      
         :                                                                                                                          
 1wu7(B) : LKYASAIGADFAVIFGERDLERGVVTIRNyTGSQENVGLDSVVEHLISQ**                                                                      
           ___________________________________________________                                                                      

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
12.3
Translation
(A)
1.2
Closure
(%)
94.5
Bending Residues
( green )
  174 - 185
  218 - 219
  261 - 267
  274 - 275
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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