Homoserine Kinase

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Homoserine Kinase
  Conformer 1
(PDB)
1fwl (B)
  Conformer 2
(PDB)
1fwl (D)
  Window Length 7
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 181 0.64   13 - 32   87 - 88   97 - 97   100 - 100   120 - 121   142 - 145   147 - 297
2 108 0.64   9 - 12   33 - 86   89 - 96   98 - 99   101 - 119   122 - 141   146 - 146

Sequence


           ______12__________________32____________________________________________________86________96____________________119_____ 
 1fwl(B) : MKVRVKAPCTSANLGVGFDVFGLCLKEPYDVIEVEAIDDKEIIIEVDDKNIPTDPDKNVAGIVAKKMIDDFNIGKGVKITIKKGVKAGSGLGSSAASSAGTAYAINELFKLNLDKLKLVD 
         :                                                                                                                          
 1fwl(D) : MKVRVKAPCTSANLGVGFDVFGLCLKEPYDVIEVEAIDDKEIIIEVDDKNIPTDPDKNVAGIVAKKMIDDFNIGKGVKITIKKGVKAGSGLGSSAASSAGTAYAINELFKLNLDKLKLVD 
           ______12__________________32____________________________________________________86________96____________________119_____ 

           ______________141_145___________________________________________________________________________________________________ 
 1fwl(B) : YASYGELASSGAKHADNVAPAIFGGFTMVTNYEPLEVLHIPIDFKLDILIAIPNISINTKEAREILPKAVGLKDLVNNVGKACGMVYALYNKDKSLFGRYMMSDKVIEPVRGKLIPNYFK 
         :                                                                                                                          
 1fwl(D) : YASYGELASSGAKHADNVAPAIFGGFTMVTNYEPLEVLHIPIDFKLDILIAIPNISINTKEAREILPKAVGLKDLVNNVGKACGMVYALYNKDKSLFGRYMMSDKVIEPVRGKLIPNYFK 
           ______________141_145___________________________________________________________________________________________________ 

           ________________________________________________________                                                                 
 1fwl(B) : IKEEVKDKVYGITISGSGPSIIAFPKEEFIDEVENILRDYYENTIRTEVGKGVEVV                                                                 
         :                                                                                                                          
 1fwl(D) : IKEEVKDKVYGITISGSGPSIIAFPKEEFIDEVENILRDYYENTIRTEVGKGVEVV                                                                 
           ________________________________________________________                                                                 

Morph

Morph animation in progress.
Status: Initialising

This morph was created using the MorphIt_Pro protein morphing technique.
For more advanced options, right click on the model.


Show console


play backwards pause play forwards

Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
5.7
Translation
(A)
0.0
Closure
(%)
82.6
Bending Residues
( green )
  12 - 13
  32 - 33
  86 - 89
  96 - 101
  119 - 122
  141 - 142
  145 - 147
Bending Region Analysis

Dynamic Contact Graph

The dynamic contact graph is still being generated. Progress: Initialising

PyMOL Script

Download and extract PyMOL PML script file Download