Dhax3

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Dhax3
  Conformer 1
(PDB) 		3v6p (A)
  Conformer 2
(PDB) 		4gg4 (A)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 87 0.88   451 - 452   455 - 474   481 - 535   543 - 552
2 66 0.7   387 - 401   404 - 406   411 - 450   453 - 454   475 - 480
3 64 0.9   536 - 542   553 - 596   607 - 616   644 - 646
4 82 0.77   311 - 386   402 - 403   407 - 410
5 64 0.55   597 - 606   617 - 643   647 - 673

Sequence


           ________________________________________________________________________________________________________________________ 
 3v6p(A) : *********************************************************************GKQALETVQRLLPVLCQAHGLTPQQVVAIASHDGGKQALETVQRLLPVLCQ 
         :                                                                                                                          
 4gg4(A) : GARALEALLTVAGELRGPPLQLDTGQLLKIAKRGGVTAVEAVHAWRNALTGAPLNLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPQQVVAIASHDGGKQALETVQRLLPVLCQ 
           ________________________________________________________________________________________________________________________ 

           ______________________________386____________401__406_410_____________________________________450_____________________47 
 3v6p(A) : AHGLTPEQVVAIASHDGGKQALETVQALLPVLCQAHGLTPEQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPQQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPQQVVAIASNGGG 
         :                                                                                                                          
 4gg4(A) : AHGLTPEQVVAIASHDGGKQALETVQALLPVLCQAHGLTPEQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPQQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPQQVVAIASNGGG 
           ______________________________386____________401__406_410_____________________________________450_____________________47 

           4___480____________________________________________________535______________552______________________________________593 
 3v6p(A) : KQALETVQRLLPVLCQAHGLTPQQVVAIASNSGGKQALETVQRLLPVLCQAHGLTPQQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPQQVVAIASHDGGKQALETVQRLLPVLCQAH 
         :                                                                                                                          
 4gg4(A) : KQALETVQRLLPVLCQAHGLTPQQVVAIASNIGGKQALETVQRLLPVLCQAHGLTPQQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPQQVVAIASHDGGKQALETVQRLLPVLCQAH 
           4___480____________________________________________________535______________552______________________________________593 

           __________606_______616________________________643______________________________________________________________________ 
 3v6p(A) : GLTPEQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPQQVVAIASNG************************************** 
         :                                                                                                                          
 4gg4(A) : GLTPEQVVAIASNGGGKQALETVQRLLPVLCQAHGLTPEQVVAIASHDGGKQALETVQRLLPVLCQAHGLTPQQVVAIASNGGGRPALESIVAQLSRPDPALAALTNDHLVALACLGGRP 
           __________606_______616________________________643______________________________________________________________________ 

           ________                                                                                                                 
 3v6p(A) : ********                                                                                                                 
         :                                                                                                                          
 4gg4(A) : ALDAVKKL                                                                                                                 
           ________                                                                                                                 

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		15.1
Translation
(A) 		-0.3
Closure
(%) 		29.5
Bending Residues
( green ) 		  65 - 66
  83 - 87
  90 - 91
  108 - 111
  114 - 117
  132 - 133
  202 - 203
  206 - 207
  225 - 227
  235 - 236
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Mixed

GLUTAMATE DEHYDROGENASE

PyMOL Script

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