Cop9 Signalosome Complex Subunit 4

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Cop9 Signalosome Complex Subunit 4
  Conformer 1
(PDB) 		4d18 (D)
  Conformer 2
(PDB) 		4d18 (L)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 216 0.2   189 - 404
2 186 0.35   3 - 188

Sequence


           ________________________________________________________________________________________________________________________ 
 4d18(D) : MAAAVRQDLAQLMNSSGSHKDLAGKYRQILEKAIQLSGAEQLEALKAFVEAMVNENVSLVISRQLLTDFCTHLPNLPDSTAKEIYHFTLEKIQPRVISFEEQVASIRQHLASIYEKEEDW 
         :                                                                                                                          
 4d18(L) : MAAAVRQDLAQLMNSSGSHKDLAGKYRQILEKAIQLSGAEQLEALKAFVEAMVNENVSLVISRQLLTDFCTHLPNLPDSTAKEIYHFTLEKIQPRVISFEEQVASIRQHLASIYEKEEDW 
           ________________________________________________________________________________________________________________________ 

           __________________________________________________________181___________________________________________________________ 
 4d18(D) : RNAAQVLVGIPLETGQKQYNVDYKLETYLKIARLYLEDDDPVQAEAYINRASLLQNESTNEQLQIHYKVCYARVLDYRRKFIEAAQRYNELSYKTIVHESERLEALKHALHCTILASAGQ 
         :                                                                                                                          
 4d18(L) : RNAAQVLVGIPLETGQKQYNVDYKLETYLKIARLYLEDDDPVQAEAYINRASLLQNESTNEQLQIHYKVCYARVLDYRRKFIEAAQRYNELSYKTIVHESERLEALKHALHCTILASAGQ 
           __________________________________________________________181___________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 4d18(D) : QRSRMLATLFKDERCQQLAAYGILEKMYLDRIIRGNQLQEFAAMLMPHQKATTADGSSILDRAVIEHNLLSASKLYNNITFEELGALLEIPAAKAEKIASQMITEGRMNGFIDQIDGIVH 
         :                                                                                                                          
 4d18(L) : QRSRMLATLFKDERCQQLAAYGILEKMYLDRIIRGNQLQEFAAMLMPHQKATTADGSSILDRAVIEHNLLSASKLYNNITFEELGALLEIPAAKAEKIASQMITEGRMNGFIDQIDGIVH 
           ________________________________________________________________________________________________________________________ 

           ______________________________________________                                                                           
 4d18(D) : FETREALPTWDKQIQSLCFQVNNLLEKISQTAPEWTAQAMEAQMAQ                                                                           
         :                                                                                                                          
 4d18(L) : FETREALPTWDKQIQSLCFQVNNLLEKISQTAPEWTAQAMEAQMAQ                                                                           
           ______________________________________________                                                                           

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		2.7
Translation
(A) 		-0.3
Closure
(%) 		32.6
Bending Residues
( green ) 		  181 - 190
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification: Shear

PyMOL Script

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