Aspartate Carbamoyltransferase Regulatory Chain

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Aspartate Carbamoyltransferase Regulatory Chain
  Conformer 1
(PDB) 		1f1b (D)
  Conformer 2
(PDB) 		1ezz (D)
  Window Length 7
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)		 Residues
1 81 1.22   20 - 100
2 48 0.87   101 - 148

Sequence


           _________________________________________________________________________________________________100____________________ 
 1f1b(D) : MTHDNKLQVEAIKRGTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKIENTFLSEDQVDQLALYAPQATVNRIDNYEVVGKSRPSLPERIDNVLVCPNSNCISHAEP 
         :                                                                                                                          
 1ezz(D) : MTHDNKLQVEAIKRGTVIDHIPAQIGFKLLSLFKLTETDQRITIGLNLPSGEMGRKDLIKIENTFLSEDQVDQLALYAPQATVNRIDNYEVVGKSRPSLPERIDNVLVCPNSNCISHAEP 
           _________________________________________________________________________________________________100____________________ 

           _________________________________                                                                                        
 1f1b(D) : VSSSFAVRKRANDIALKCKYCEKEFSHNVVLAN                                                                                        
         :                                                                                                                          
 1ezz(D) : VSSSFAVRKRANDIALKCKYCEKEFSHNVVLAN                                                                                        
           _________________________________                                                                                        

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Domain Pairs

Property Value
Fixed Domain
( blue ) 		1
Moving Domain
( red ) 		2
Rotation Angle
(deg) 		13.3
Translation
(A) 		1.5
Closure
(%) 		77.5
Bending Residues
( green ) 		  100 - 101
Bending Region Analysis

Dynamic Contact Graph

The dynamic contact graph is still being generated. Progress: Initialising

PyMOL Script

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