Atp-Dependent Hslu Protease Atp-Binding Subunit Hslu

(All numbering and residues are taken from first PDB file)

Run Details Domains Sequence Morph Domain Pairs Contact Graph

DynDom run details

  Property   Value
  Name Atp-Dependent Hslu Protease Atp-Binding Subunit Hslu
  Conformer 1
(PDB)
1g3i (A)
  Conformer 2
(PDB)
1do2 (B)
  Window Length 5
  Minimum ratio 1.0
  Minimum domain size 20

Domains

Domain Size Backbone RMSD
(A)
Residues
1 216 1.78   4 - 336
2 96 0.92   337 - 432

Sequence


           ________________________________________________________________________________________________________________________ 
 1g3i(A) : SEMTPREIVSELDQHIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTeV-------DSIIRDLTDSAMKLVRQQEIAKNR- 
         :                                                                                                                          
 1do2(B) : SEMTPREIVSELDKHIIGQDNAKRSVAIALRNRWRRMQLNEELRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRDLTDAAVKMVRVQAIEKNRY 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________________________________________________________________________ 
 1g3i(A) : ---------------------------------------------------------------------iDDEAAKLINPEELKQKAIDAVEQNGIVFIDEIDKICKKgA----DVSREG 
         :                                                                                                                          
 1do2(B) : RAEELAEERILDVLIPPAKNNWGQTEQQQEPSAARQAFRKKLREGQLDDKEIEkQKARKLKIKDAMKLLIEEEAAKLVNPEELKQDAIDAVEQHGIVFIDEIDKICKRGESSGPDVSREG 
           ________________________________________________________________________________________________________________________ 

           ________________________________________________________336_____________________________________________________________ 
 1g3i(A) : VQRDLLPLVEGSTVSTKHGMVKTDHILFIASGAFQVARPSDLIPELQGRLPIRVELTALSAADFERILTEPHASLTEQYKALMATEGVNIAFTTDAVKKIAEAAFRVNEKTENIGARRLH 
         :                                                                                                                          
 1do2(B) : VQRDLLPLVEGCTVSTKHGMVKTDHILFIASGAFQIAKPSDLIPELQGRLPIRVELQALTTSDFERILTEPNASITVQYKALMATEGVNIEFTDSGIKRIAEAAWQVNESTENIGARRLH 
           ________________________________________________________335_____________________________________________________________ 

           _______________________________________________                                                                          
 1g3i(A) : TVMERLMDKISFSASDMNGQTVNIDAAYVADALGEVVENEDLSRFIL                                                                          
         :                                                                                                                          
 1do2(B) : TVLERLMEEISYDASDLSGQNITIDADYVSKHLDALVADEDLSRFIL                                                                          
           _______________________________________________                                                                          

Morph

This morph was created using the MorphIt_Pro protein morphing technique.
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Domain Pairs

Property Value
Fixed Domain
( blue )
1
Moving Domain
( red )
2
Rotation Angle
(deg)
17.8
Translation
(A)
0.0
Closure
(%)
51.2
Bending Residues
( green )
  336 - 337
Bending Region Analysis

Dynamic Contact Graph

Conformer 1 Contact:
Residue 1 ———› Residue 2

Conformer 2 Contact:
Residue 2 ———› Residue 1

Movement classification:

No Contacts

PyMOL Script

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